RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 STAU1O95793 577 aaKnown RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 NELFEP18615 380 aaKnown RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 TFEBP19484 476 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 AOC1P19801 751 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 GLUD2P49448 558 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 PLK1P53350 603 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 ARHGAP1Q07960 439 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 CTBP1Q13363 440 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 ZBTB49Q6ZSB9 765 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 BEND4Q6ZU67 534 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 PQLC1Q8N2U9 271 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 BLOC1S5Q8TDH9 187 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 RCN3Q96D15 328 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 DHRS4Q9BTZ2 278 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 MLPHQ9BV36 600 aaPredicted RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 GATA5Q9BWX5 397 aaPredicted RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 ZNF717Q9BY31 904 aaPredicted RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 C1orf21Q9H246 121 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 SLC17A6Q9P2U8 582 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 LRFN2Q9ULH4 789 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 PSMD13Q9UNM6 376 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 COQ6Q9Y2Z9 468 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 A0A087X1B8 175 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 TRAV20A0A0B4J274 112 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 ZNF487B1APH4 448 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 KPNA5O15131 536 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 BRINP1O60477 761 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 TPST1O60507 370 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 ETV4P43268 484 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 LILRA4P59901 499 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 RFTN1Q14699 578 aaPredicted RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 KDELC1Q6UW63 502 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 AGMOQ6ZNB7 445 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 NUP93Q8N1F7 819 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 TBC1D19Q8N5T2 526 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 ZNF781Q8N8C0 355 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 TTLQ8NG68 377 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 SLC9A7Q96T83 725 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 TRIM39Q9HCM9 518 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 CDH9Q9ULB4 789 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 SMIM35A0A1B0GVV1 85 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 SUPT3HB4E1H0 165 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 C9IYK1 514 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 KRT6AP02538 564 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 KRT6BP04259 564 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 CYP17A1P05093 508 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 DHRS4L1P0CG22 281 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 CPB1P15086 417 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 VCLP18206 1134 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 MPSTP25325 297 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 ARL13AQ5H913 290 aaPredicted RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 OVOS1Q6IE37 1185 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 ERAP2Q6P179 960 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 KLHL35Q6PF15 583 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 POTEHQ6S545 545 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 GLB1LQ6UWU2 654 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 PCDH20Q8N6Y1 951 aaKnown RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 ATP6V0D2Q8N8Y2 350 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 HASPINQ8TF76 798 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 SKA2Q8WVK7 121 aaPredicted RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 ASB12Q8WXK4 309 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 NXPE3Q969Y0 559 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 MTFMTQ96DP5 389 aaKnown RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 USB1Q9BQ65 265 aaKnown RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 C8orf33Q9H7E9 229 aaPredicted RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 MRM3Q9HC36 420 aaKnown RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 ZNF358Q9NW07 568 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 COQ3Q9NZJ6 369 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 FBXO5Q9UKT4 447 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 POMPQ9Y244 141 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 PSMD12O00232 456 aaPredicted RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 MRASO14807 208 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 PPEF2O14830 753 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 RHOBTB1O94844 696 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 MMP3P08254 477 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 F7P08709 466 aaPredicted RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 PTPN3P26045 913 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 NDUFV1P49821 464 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 CCNG1P51959 295 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 LIMK1P53667 647 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 KCNK10P57789 538 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 CYP4F8P98187 520 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 FOLH1Q04609 750 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 DMC1Q14565 340 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 INTS6LQ5JSJ4 861 aaKnown RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 FAM35AQ86V20 835 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 LSMEM2Q8N112 164 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 ZSCAN18Q8TBC5 510 aaPredicted RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 AZIN2Q96A70 460 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 ZFRQ96KR1 1074 aaKnown RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 MARK4Q96L34 752 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 RPRD1AQ96P16 312 aaPredicted RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 MRPL57Q9BQC6 102 aaKnown RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 SLC25A23Q9BV35 468 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 PITHD1Q9GZP4 211 aaPredicted RBP10.42□□□□□ -0.74
LIG1-220ENST00000601091 TXNRD2Q9NNW7 524 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 ORC6Q9Y5N6 252 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 PTCH2Q9Y6C5 1203 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 FAM221BA6H8Z2 402 aa10.42□□□□□ -0.74
LIG1-220ENST00000601091 TADA2AO75478 443 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms