RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.38■□□□□ 0.69
DDX55-207ENST00000540763 SHOC2Q9UQ13 582 aa19.38■□□□□ 0.69
DDX55-207ENST00000540763 A0A0U1RQS6 177 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 AP3B1O00203 1094 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 CDX4O14627 284 aaPredicted RBP19.37■□□□□ 0.69
DDX55-207ENST00000540763 USP12O75317 370 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 CRTAMO95727 393 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 APRTP07741 180 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 THOP1P52888 689 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 OLIG2Q13516 323 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 SPARCL1Q14515 664 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 HLA-BQ31612 363 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 PDPK2PQ6A1A2 396 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 ZNF572Q7Z3I7 529 aaPredicted RBP19.37■□□□□ 0.69
DDX55-207ENST00000540763 PARGQ86W56 976 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 TAB3Q8N5C8 712 aaPredicted RBP19.37■□□□□ 0.69
DDX55-207ENST00000540763 NETO1Q8TDF5 533 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 AP2M1Q96CW1 435 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 ELF4Q99607 663 aaPredicted RBP19.37■□□□□ 0.69
DDX55-207ENST00000540763 APOOQ9BUR5 198 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 FAM83DQ9H4H8 585 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 WDR26Q9H7D7 661 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 FSCN3Q9NQT6 498 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 IL17CQ9P0M4 197 aa19.37■□□□□ 0.69
DDX55-207ENST00000540763 C2orf81A6NN90 581 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 KELP23276 732 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 HTR1BP28222 390 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 RXRGP48443 463 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 ARRB1P49407 418 aaPredicted RBP19.36■□□□□ 0.69
DDX55-207ENST00000540763 CKAP4Q07065 602 aaKnown RBP19.36■□□□□ 0.69
DDX55-207ENST00000540763 GPS1Q13098 491 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 SLC14A1Q13336 389 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 PTK6Q13882 451 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 TUBB2AQ13885 445 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 PDE1CQ14123 709 aaPredicted RBP19.36■□□□□ 0.69
DDX55-207ENST00000540763 DHX34Q14147 1143 aaKnown RBP19.36■□□□□ 0.69
DDX55-207ENST00000540763 NFATC4Q14934 902 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 RAET1GQ6H3X3 334 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 ADAMTSL4Q6UY14 1074 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 PLA2G15Q8NCC3 412 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 TUBB2BQ9BVA1 445 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 GTPBP2Q9BX10 602 aaKnown RBP19.36■□□□□ 0.69
DDX55-207ENST00000540763 TEX101Q9BY14 249 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 GAREM1Q9H706 876 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 CASS4Q9NQ75 786 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 RXFP3Q9NSD7 469 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 CDC23Q9UJX2 597 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 PKP3Q9Y446 797 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 PCDHGB2Q9Y5G2 931 aa19.36■□□□□ 0.69
DDX55-207ENST00000540763 CACNA1BQ00975 2339 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 A0A1B0GTQ1 180 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 CACNB4O00305 520 aaPredicted RBP19.35■□□□□ 0.69
DDX55-207ENST00000540763 AURKAO14965 403 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 SOD1P00441 154 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 MYCLP1P12525 358 aaPredicted RBP19.35■□□□□ 0.69
DDX55-207ENST00000540763 LPOP22079 712 aaPredicted RBP19.35■□□□□ 0.69
DDX55-207ENST00000540763 GPR1P46091 355 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 CCT8P50990 548 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 LAMB3Q13751 1172 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 KCNJ11Q14654 390 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 PPP1R7Q15435 360 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 ARMC3Q5W041 872 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 PPP1R21Q6ZMI0 780 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 RFLNAQ6ZTI6 216 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 TRAM1L1Q8N609 369 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 ZSCAN5AQ9BUG6 496 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 PHPT1Q9NRX4 125 aaPredicted RBP19.35■□□□□ 0.69
DDX55-207ENST00000540763 CD84Q9UIB8 345 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 PLXNB3Q9ULL4 1909 aa19.35■□□□□ 0.69
DDX55-207ENST00000540763 K7ESM1 405 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 PCDHGA12O60330 932 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 SLC4A1P02730 911 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 BPIP17213 487 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 PTGIRP43119 386 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 CDK3Q00526 305 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 FZD2Q14332 565 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 TRIP13Q15645 432 aaPredicted RBP19.34■□□□□ 0.69
DDX55-207ENST00000540763 STPG1Q5TH74 334 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 HEATR4Q86WZ0 1026 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 PELI3Q8N2H9 469 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 DNAAF3Q8N9W5 541 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 GPR26Q8NDV2 337 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 SPATA4Q8NEY3 305 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 OR52K1Q8NGK4 314 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 SCAMP4Q969E2 229 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 FUBP1Q96AE4 644 aaKnown RBP19.34■□□□□ 0.69
DDX55-207ENST00000540763 TBATAQ96M53 351 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 WDR92Q96MX6 357 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 RANBP9Q96S59 729 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 RTKNQ9BST9 563 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 RIOK2Q9BVS4 552 aaKnown RBP19.34■□□□□ 0.69
DDX55-207ENST00000540763 OR1A2Q9Y585 309 aa19.34■□□□□ 0.69
DDX55-207ENST00000540763 TDRD6O60522 2096 aaKnown RBP19.34■□□□□ 0.69
DDX55-207ENST00000540763 LAMA1P25391 3075 aa19.33■□□□□ 0.69
DDX55-207ENST00000540763 COL5A1P20908 1838 aaPredicted RBP19.33■□□□□ 0.69
DDX55-207ENST00000540763 KNL1Q8NG31 2342 aa19.33■□□□□ 0.69
DDX55-207ENST00000540763 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.33■□□□□ 0.68
DDX55-207ENST00000540763 TNFRSF10CO14798 259 aa19.33■□□□□ 0.68
DDX55-207ENST00000540763 STX7O15400 261 aaKnown RBP19.33■□□□□ 0.68
DDX55-207ENST00000540763 GDF9O60383 454 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms