RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 SLC14A2Q15849 920 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 QPCTQ16769 361 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 CERCAMQ5T4B2 595 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 NPNTQ6UXI9 565 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 PDZD3Q86UT5 571 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 RFX6Q8HWS3 928 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 LPCAT1Q8NF37 534 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 PTCD2Q8WV60 388 aaKnown RBP19.32■□□□□ 0.68
USP40-207ENST00000450940 SCAMP4Q969E2 229 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 IMP4Q96G21 291 aaKnown RBP19.32■□□□□ 0.68
USP40-207ENST00000450940 ATXN7L3BQ96GX2 97 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 MRFAP1L1Q96HT8 127 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 COX14Q96I36 57 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 HIC2Q96JB3 615 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 TRIB3Q96RU7 358 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 ASCL3Q9NQ33 180 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 CD84Q9UIB8 345 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 MOSPD1Q9UJG1 213 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 SUFUQ9UMX1 484 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 PCDHGA8Q9Y5G5 932 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 PCDHA13Q9Y5I0 950 aa19.32■□□□□ 0.68
USP40-207ENST00000450940 A0A1W2PQM1 296 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 RGSL1A5PLK6 1076 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 RRP8O43159 456 aaKnown RBP19.31■□□□□ 0.68
USP40-207ENST00000450940 FECHP22830 423 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 POLD2P49005 469 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 SPIDRQ14159 915 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 TFDP2Q14188 446 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 C14orf28Q4W4Y0 310 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 BZW1Q7L1Q6 419 aaKnown RBP19.31■□□□□ 0.68
USP40-207ENST00000450940 SFTPA2Q8IWL1 248 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 PRR11Q96HE9 360 aaPredicted RBP19.31■□□□□ 0.68
USP40-207ENST00000450940 DCBLD2Q96PD2 775 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 PANX2Q96RD6 677 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 WDR24Q96S15 920 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 AGAP2Q99490 1192 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 MLPHQ9BV36 600 aaPredicted RBP19.31■□□□□ 0.68
USP40-207ENST00000450940 ADGRE3Q9BY15 652 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 GSDMCQ9BYG8 508 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 SLC25A51Q9H1U9 297 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 SPATS2LQ9NUQ6 558 aaKnown RBP19.31■□□□□ 0.68
USP40-207ENST00000450940 ST14Q9Y5Y6 855 aa19.31■□□□□ 0.68
USP40-207ENST00000450940 PTPRQQ9UMZ3 2332 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 NUDT21O43809 227 aaKnown RBP19.3■□□□□ 0.68
USP40-207ENST00000450940 FGF1P05230 155 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 ABCG1P45844 678 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 NOP2P46087 812 aaKnown RBP19.3■□□□□ 0.68
USP40-207ENST00000450940 ZNF75DP51815 510 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 CCL7P80098 99 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 ILF3Q12906 894 aaKnown RBP eCLIP19.3■□□□□ 0.68
USP40-207ENST00000450940 PRKD1Q15139 912 aaPredicted RBP19.3■□□□□ 0.68
USP40-207ENST00000450940 TEX44Q53QW1 395 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 ODF2Q5BJF6 829 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 C11orf63Q6NUN7 778 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 SPOCD1Q6ZMY3 1216 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 LRRC69Q6ZNQ3 347 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 NT5DC3Q86UY8 548 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 KATNAL2Q8IYT4 538 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 EXD1Q8NHP7 514 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 KIAA1524Q8TCG1 905 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 SLC46A1Q96NT5 459 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 RIOK2Q9BVS4 552 aaKnown RBP19.3■□□□□ 0.68
USP40-207ENST00000450940 RBSNQ9H1K0 784 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 LRRN3Q9H3W5 708 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 DPEP2Q9H4A9 486 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 SATB2Q9UPW6 733 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 CACNA1GO43497 2377 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 BPTFQ12830 3046 aa19.3■□□□□ 0.68
USP40-207ENST00000450940 C1orf232A0A0U1RR37 186 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 GOLGA6CA6NDK9 693 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 GOLGA6BA6NDN3 693 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 TMX2-CTNND1H3BSU7 103 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 GOLGA6DP0CG33 693 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 TNNT1P13805 278 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 ITPKBP27987 946 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 CYLC1P35663 651 aaPredicted RBP19.29■□□□□ 0.68
USP40-207ENST00000450940 ADCY8P40145 1251 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 MLLT3P42568 568 aaPredicted RBP19.29■□□□□ 0.68
USP40-207ENST00000450940 GNPDA1P46926 289 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 SPINT3P49223 89 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 DYNLT1P63172 113 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 SPA17Q15506 151 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 WDR36Q8NI36 951 aaKnown RBP19.29■□□□□ 0.68
USP40-207ENST00000450940 LIN37Q96GY3 246 aaPredicted RBP19.29■□□□□ 0.68
USP40-207ENST00000450940 TEKT5Q96M29 485 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 AGAP3Q96P47 875 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 GFM1Q96RP9 751 aaKnown RBP19.29■□□□□ 0.68
USP40-207ENST00000450940 CEP41Q9BYV8 373 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 GOLPH3Q9H4A6 298 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 GOLGA6AQ9NYA3 693 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 TAAR2Q9P1P5 351 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 LRIT1Q9P2V4 623 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 CNOT6Q9ULM6 557 aaKnown RBP19.29■□□□□ 0.68
USP40-207ENST00000450940 RNF215Q9Y6U7 377 aa19.29■□□□□ 0.68
USP40-207ENST00000450940 SCN8AQ9UQD0 1980 aa19.28■□□□□ 0.68
USP40-207ENST00000450940 CCDC187A0A096LP49 1063 aa19.28■□□□□ 0.68
USP40-207ENST00000450940 B4DGG1 531 aa19.28■□□□□ 0.68
USP40-207ENST00000450940 D6RAR5 112 aa19.28■□□□□ 0.68
USP40-207ENST00000450940 CST8O60676 142 aa19.28■□□□□ 0.68
USP40-207ENST00000450940 ZRANB2O95218 330 aaKnown RBP eCLIP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms