RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 TPH1P17752 444 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 PSMA3P25788 255 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 DEKP35659 375 aaKnown RBP14.34□□□□□ -0.11
CSTF3-202ENST00000431742 TRIM23P36406 574 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 ZNF140P52738 457 aaPredicted RBP14.34□□□□□ -0.11
CSTF3-202ENST00000431742 YPEL5P62699 121 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 INPP5AQ14642 412 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 KIF19Q2TAC6 998 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 TPRG1LQ5T0D9 272 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 RNASEH2BQ5TBB1 312 aaKnown RBP14.34□□□□□ -0.11
CSTF3-202ENST00000431742 PNCKQ6P2M8 343 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 PPP1R21Q6ZMI0 780 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 PRR23CQ6ZRP0 262 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 Q6ZSR6 202 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 PTAR1Q7Z6K3 402 aaPredicted RBP14.34□□□□□ -0.11
CSTF3-202ENST00000431742 SPATS2Q86XZ4 545 aaKnown RBP14.34□□□□□ -0.11
CSTF3-202ENST00000431742 NAT8LQ8N9F0 302 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 AP2M1Q96CW1 435 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 KLHDC7BQ96G42 594 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 PLEKHG4BQ96PX9 1271 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 RANBP9Q96S59 729 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 RIOK2Q9BVS4 552 aaKnown RBP14.34□□□□□ -0.11
CSTF3-202ENST00000431742 NUSAP1Q9BXS6 441 aaKnown RBP14.34□□□□□ -0.11
CSTF3-202ENST00000431742 ZDHHC5Q9C0B5 715 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 FAM83DQ9H4H8 585 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 FSCN3Q9NQT6 498 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 RAD18Q9NS91 495 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.34□□□□□ -0.11
CSTF3-202ENST00000431742 ARL5AQ9Y689 179 aa14.34□□□□□ -0.11
CSTF3-202ENST00000431742 ASCC3Q8N3C0 2202 aaKnown RBP14.33□□□□□ -0.12
CSTF3-202ENST00000431742 FAM187AA6NFU0 413 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 MROH6A6NGR9 719 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 C2orf81A6NN90 581 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 ESPNB1AK53 854 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 RAD51CO43502 376 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 FOXD2O60548 495 aaPredicted RBP14.33□□□□□ -0.12
CSTF3-202ENST00000431742 MAGEC1O60732 1142 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 PPFIA2O75334 1257 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 CRTAMO95727 393 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 HOXC4P09017 264 aaPredicted RBP14.33□□□□□ -0.12
CSTF3-202ENST00000431742 ENGP17813 658 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 LPOP22079 712 aaPredicted RBP14.33□□□□□ -0.12
CSTF3-202ENST00000431742 ADCY8P40145 1251 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 KIAA1024LP59773 190 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 PDE1BQ01064 536 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 POU6F1Q14863 301 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 CERCAMQ5T4B2 595 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 LRRC8BQ6P9F7 803 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 ADAMTSL4Q6UY14 1074 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 CAND1Q86VP6 1230 aaKnown RBP14.33□□□□□ -0.12
CSTF3-202ENST00000431742 DCP2Q8IU60 420 aaKnown RBP14.33□□□□□ -0.12
CSTF3-202ENST00000431742 PPIL6Q8IXY8 311 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 GPR161Q8N6U8 529 aaKnown RBP14.33□□□□□ -0.12
CSTF3-202ENST00000431742 DNAAF3Q8N9W5 541 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 MCUQ8NE86 351 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 DTX3LQ8TDB6 740 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 FUBP1Q96AE4 644 aaKnown RBP14.33□□□□□ -0.12
CSTF3-202ENST00000431742 SKA1Q96BD8 255 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 FAM122AQ96E09 287 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 AGAP2Q99490 1192 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 HINFPQ9BQA5 517 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 APOOQ9BUR5 198 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 TEX101Q9BY14 249 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 ERVMER34-1Q9H9K5 563 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 KCTD3Q9Y597 815 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 SNX11Q9Y5W9 270 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 CEP250Q9BV73 2442 aa14.33□□□□□ -0.12
CSTF3-202ENST00000431742 SPTY2D1-AS1A0A0U1RR47 76 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 FADS2P1A8MWK0 482 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 AP3B1O00203 1094 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 GAPDHSO14556 408 aaPredicted RBP14.32□□□□□ -0.12
CSTF3-202ENST00000431742 TP73O15350 636 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 STX7O15400 261 aaKnown RBP14.32□□□□□ -0.12
CSTF3-202ENST00000431742 BUD23O43709 281 aaKnown RBP14.32□□□□□ -0.12
CSTF3-202ENST00000431742 SEC31AO94979 1220 aaKnown RBP14.32□□□□□ -0.12
CSTF3-202ENST00000431742 PYGLP06737 847 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 SYPP08247 313 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 MLNP12872 115 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 MAGEA3P43357 314 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 TERF1P54274 439 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 C21orf59P57076 290 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 PTPRCAPQ14761 206 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 NFATC4Q14934 902 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 ZNF423Q2M1K9 1284 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 IZUMO3Q5VZ72 239 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 ZDHHC20Q5W0Z9 365 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 PDPK2PQ6A1A2 396 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 RAET1GQ6H3X3 334 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 IL27RAQ6UWB1 636 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 MACC1Q6ZN28 852 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 MAATS1Q7Z4T9 603 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 HOOK3Q86VS8 718 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 HEATR4Q86WZ0 1026 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 TRAM1L1Q8N609 369 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 MNS1Q8NEH6 495 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 ZSCAN5AQ9BUG6 496 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 WDR26Q9H7D7 661 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 XAB2Q9HCS7 855 aaKnown RBP14.32□□□□□ -0.12
CSTF3-202ENST00000431742 BPIFA1Q9NP55 256 aa14.32□□□□□ -0.12
CSTF3-202ENST00000431742 IL26Q9NPH9 171 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms