RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 TOR1BO14657 336 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 STX16O14662 325 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TMPRSS2O15393 492 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 BUD23O43709 281 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 EDF1O60869 148 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PRKD3O94806 890 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NOL4O94818 638 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 BPNT1O95861 308 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 IFNA7P01567 189 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 HPXP02790 462 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 HEXBP07686 556 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 KRT19P08727 400 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ABHD2P08910 425 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ACADMP11310 421 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PRPS2P11908 318 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 APEHP13798 732 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TACR2P21452 398 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DNAJB1P25685 340 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PIK3R1P27986 724 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PDHA2P29803 388 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PBLDP30039 288 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MAT2AP31153 395 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TRHRP34981 398 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ETV4P43268 484 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MAGEA1P43355 309 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PCP4P48539 62 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SERPINH1P50454 418 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 HLCSP50747 726 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NDST1P52848 882 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 GBX2P52951 348 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PMS1P54277 932 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 COPZ1P61923 177 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ERVK-24P63145 666 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CCNA1P78396 465 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 IFITM2Q01629 132 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FAAP100Q0VG06 881 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 IFIT5Q13325 482 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SNAPC2Q13487 334 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 KCNC3Q14003 757 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TFDP1Q14186 410 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SLC9A5Q14940 896 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PTPRRQ15256 657 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SEC23AQ15436 765 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DLG2Q15700 870 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TAF12Q16514 161 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CYP2A13Q16696 494 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TXNRD1Q16881 649 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 EIF2S3LQ2VIR3 472 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CDNFQ49AH0 187 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TCP11X2Q5H9J9 407 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ARMCX4Q5H9R4 360 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FAM209BQ5JX69 171 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 LDLRAP1Q5SW96 308 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DNLZQ5SXM8 178 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ADGRF1Q5T601 910 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MEI1Q5TIA1 1274 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FAM171A1Q5VUB5 890 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 AGAP6Q5VW22 663 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TCEAL6Q6IPX3 200 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NFRKBQ6P4R8 1299 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NSMFQ6X4W1 530 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 HTR3DQ70Z44 454 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FAM214BQ7L5A3 538 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 COPS6Q7L5N1 327 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TFAP2DQ7Z6R9 452 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 STRA8Q7Z7C7 330 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 KBTBD6Q86V97 674 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 RALGPS2Q86X27 583 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FAM217AQ8IXS0 508 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CARFQ8N187 725 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PQLC1Q8N2U9 271 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ZCCHC7Q8N3Z6 543 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 RASGEF1CQ8N431 466 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SPATA6LQ8N4H0 392 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 KLHL36Q8N4N3 616 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 EIF4E3Q8N5X7 224 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CCDC185Q8N715 623 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ANKRD42Q8N9B4 389 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TXNDC5Q8NBS9 432 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ZNF540Q8NDQ6 660 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 OR5H6Q8NGV6 325 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TCP10LQ8TDR4 215 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 GDPD5Q8WTR4 605 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NRG4Q8WWG1 115 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CASKIN2Q8WXE0 1202 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 STON2Q8WXE9 905 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 COPS5Q92905 334 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 C12orf43Q96C57 262 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TMCO6Q96DC7 493 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MAP6Q96JE9 813 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NSMCE2Q96MF7 247 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 AGAP4Q96P64 663 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ERGIC2Q96RQ1 377 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 WRNIP1Q96S55 665 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 C12orf57Q99622 126 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 KCNS3Q9BQ31 491 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TRIM62Q9BVG3 475 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TARS2Q9BW92 718 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 GSDMCQ9BYG8 508 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ALX4Q9H161 411 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms