RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 NDRG1Q92597 394 aaKnown RBP16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 C2orf49Q9BVC5 232 aaPredicted RBP16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 NFKBIZQ9BYH8 718 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 PMF1-BGLAPU3KQ54 211 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 TCHHQ07283 1943 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 DDNO94850 711 aaPredicted RBP16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 ENO2P09104 434 aaPredicted RBP16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 CTPS1P17812 591 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 PRDX6P30041 224 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 TUFMP49411 452 aaKnown RBP16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 SREBF2Q12772 1141 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 CPSF7Q8N684 471 aaKnown RBP16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 C12orf50Q8NA57 414 aaPredicted RBP16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 LRRC20Q8TCA0 184 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 LPPQ93052 612 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 MFSD3Q96ES6 412 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 Q96MT0 163 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 TIMM22Q9Y584 194 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 A6NHS1 94 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 SPATA31C2B4DYI2 1134 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 ITGAXP20702 1163 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 LSAMPQ13449 338 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 TEX44Q53QW1 395 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 XKR6Q5GH73 641 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 CLEC6AQ6EIG7 209 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 PLET1Q6UQ28 207 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 SLC16A10Q8TF71 515 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 CD101Q93033 1021 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 CDCA5Q96FF9 252 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 TPK1Q9H3S4 243 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 SP140LQ9H930 580 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 TMPRSS4Q9NRS4 437 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 ATRNO75882 1429 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 ITGA2P17301 1181 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 LPOP22079 712 aaPredicted RBP16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 HOXA10P31260 410 aaPredicted RBP16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 WDR4P57081 412 aaKnown RBP16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 TRIM32Q13049 653 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 EMC10Q5UCC4 262 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 ZNF781Q8N8C0 355 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 DUSP16Q9BY84 665 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 GLOD4Q9HC38 313 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 BBIP1A8MTZ0 92 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 ADM5C9JUS6 153 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 TP73O15350 636 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 ADSLP30566 484 aaPredicted RBP16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 CCR4P51679 360 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 ENPEPQ07075 957 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 GRM3Q14832 879 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 NDUFAF6Q330K2 333 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 C5orf22Q49AR2 442 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 FBXO48Q5FWF7 155 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 FKBP1CQ5VVH2 108 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 ANKRD23Q86SG2 305 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 DENND1CQ8IV53 801 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 PEX5LQ8IYB4 626 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 TSSK3Q96PN8 268 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 ZNF222Q9UK12 451 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 PABPC4LP0CB38 370 aaKnown RBP16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 ARF4P18085 180 aaPredicted RBP16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 AQP1P29972 269 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 ADRA1BP35368 520 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 ZBED5Q49AG3 693 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 KRT74Q7RTS7 529 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 COMMD2Q86X83 199 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 LRRC49Q8IUZ0 686 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 DCBLD1Q8N8Z6 715 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 LRTOMTQ8WZ04 291 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 SPG21Q9NZD8 308 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 ANGPT4Q9Y264 503 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 SGTAO43765 313 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 PLIN3O60664 434 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 LYPLA2O95372 231 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 SERPINA1P01009 418 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 C4BPAP04003 597 aaKnown RBP16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 EPHX2P34913 555 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 MTHFRP42898 656 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 RHBGQ9H310 441 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 TRPV5Q9NQA5 729 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 ZDHHC18Q9NUE0 388 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 SMPD3Q9NY59 655 aaPredicted RBP16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 SSNA1O43805 119 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 PLOD3O60568 738 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 NUDT14O95848 222 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 NTSP30990 170 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 THAP5Q7Z6K1 395 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 CPNE8Q86YQ8 564 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 RIOX2Q8IUF8 465 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 ITCHQ96J02 903 aa16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 GBA2Q9HCG7 927 aaPredicted RBP16.43■□□□□ 0.22
SH3RF1-201ENST00000284637 SUV39H1O43463 412 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 LSM12Q3MHD2 195 aaKnown RBP16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 POM121L1PQ3SYA9 428 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 HECTD2Q5U5R9 776 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 LDB1Q86U70 411 aaPredicted RBP16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 TCEA3O75764 348 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 MC4RP32245 332 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 ECT2LQ008S8 904 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms