RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 PELI3Q8N2H9 469 aa18.18■□□□□ 0.5
VCX3A-203ENST00000612369 GPR156Q8NFN8 814 aa18.18■□□□□ 0.5
VCX3A-203ENST00000612369 CCDC3Q9BQI4 270 aa18.18■□□□□ 0.5
VCX3A-203ENST00000612369 CYP4F12Q9HCS2 524 aa18.18■□□□□ 0.5
VCX3A-203ENST00000612369 MRPL40Q9NQ50 206 aaKnown RBP18.18■□□□□ 0.5
VCX3A-203ENST00000612369 MOSPD1Q9UJG1 213 aa18.18■□□□□ 0.5
VCX3A-203ENST00000612369 CHKBQ9Y259 395 aa18.18■□□□□ 0.5
VCX3A-203ENST00000612369 PCDHB1Q9Y5F3 818 aa18.18■□□□□ 0.5
VCX3A-203ENST00000612369 A0A0A6YYK5 440 aaPredicted RBP18.17■□□□□ 0.5
VCX3A-203ENST00000612369 KCNK1O00180 336 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 PSTPIP1O43586 416 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 BRINP1O60477 761 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 USP12O75317 370 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 CEACAM5P06731 702 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 CYLC1P35663 651 aaPredicted RBP18.17■□□□□ 0.5
VCX3A-203ENST00000612369 NOP2P46087 812 aaKnown RBP18.17■□□□□ 0.5
VCX3A-203ENST00000612369 GPR1P46091 355 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 NR2C2P49116 596 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 AP1B1Q10567 949 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 TFDP2Q14188 446 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 SPA17Q15506 151 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 KCTD16Q68DU8 428 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 NYAP1Q6ZVC0 841 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 RFX6Q8HWS3 928 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.17■□□□□ 0.5
VCX3A-203ENST00000612369 KYQ8NBH2 561 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 FAM46DQ8NEK8 389 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 SNIP1Q8TAD8 396 aaKnown RBP18.17■□□□□ 0.5
VCX3A-203ENST00000612369 FGF11Q92914 225 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 RNF25Q96BH1 459 aaPredicted RBP18.17■□□□□ 0.5
VCX3A-203ENST00000612369 AP2M1Q96CW1 435 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 MRFAP1L1Q96HT8 127 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 OLFM3Q96PB7 478 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 ADGRE3Q9BY15 652 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 FRMD8Q9BZ67 464 aaPredicted RBP18.17■□□□□ 0.5
VCX3A-203ENST00000612369 TMEM168Q9H0V1 697 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 ABCG8Q9H221 673 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 TRNAU1APQ9NX07 287 aaKnown RBP18.17■□□□□ 0.5
VCX3A-203ENST00000612369 ALG6Q9Y672 507 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 RP1P56715 2156 aa18.17■□□□□ 0.5
VCX3A-203ENST00000612369 ADAMTS20P59510 1910 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 ANKRD66B4E2M5 251 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 DXOO77932 396 aaKnown RBP18.16■□□□□ 0.5
VCX3A-203ENST00000612369 PNLIPP16233 465 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 EIF2S3P41091 472 aaKnown RBP18.16■□□□□ 0.5
VCX3A-203ENST00000612369 LSSP48449 732 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 STC1P52823 247 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 PEX6Q13608 980 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 SPIDRQ14159 915 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 PTPRRQ15256 657 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 TAZQ16635 292 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 MFSD7Q6UXD7 560 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 ADAMTSL4Q6UY14 1074 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 CNTD1Q8N815 330 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 GPBAR1Q8TDU6 330 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 LRRN4Q8WUT4 740 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 CALR3Q96L12 384 aaKnown RBP18.16■□□□□ 0.5
VCX3A-203ENST00000612369 ZNF578Q96N58 590 aaPredicted RBP18.16■□□□□ 0.5
VCX3A-203ENST00000612369 PANX2Q96RD6 677 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 MLPHQ9BV36 600 aaPredicted RBP18.16■□□□□ 0.5
VCX3A-203ENST00000612369 POLR1BQ9H9Y6 1135 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 CARS2Q9HA77 564 aaKnown RBP18.16■□□□□ 0.5
VCX3A-203ENST00000612369 SIRPGQ9P1W8 387 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 SLC17A4Q9Y2C5 497 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 HYOU1Q9Y4L1 999 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 PCDHA13Q9Y5I0 950 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 CELSR3Q9NYQ7 3312 aa18.16■□□□□ 0.5
VCX3A-203ENST00000612369 RGSL1A5PLK6 1076 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 GOLGA6CA6NDK9 693 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 GOLGA6BA6NDN3 693 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 NTN3O00634 580 aaPredicted RBP18.15■□□□□ 0.5
VCX3A-203ENST00000612369 RRP8O43159 456 aaKnown RBP18.15■□□□□ 0.5
VCX3A-203ENST00000612369 MMP2P08253 660 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 GOLGA6DP0CG33 693 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 TNNT1P13805 278 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 GLB1P16278 677 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 CD86P42081 329 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 CDKN2BP42772 138 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 SKOR1P84550 965 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 ILF3Q12906 894 aaKnown RBP eCLIP18.15■□□□□ 0.5
VCX3A-203ENST00000612369 ZBTB17Q13105 803 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 TCEA2Q15560 299 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 SLC14A2Q15849 920 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 TBC1D25Q3MII6 688 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 C19orf48Q6RUI8 117 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 IGF2-ASQ6U949 168 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 LRRC69Q6ZNQ3 347 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 LPCAT1Q8NF37 534 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 KIAA1524Q8TCG1 905 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 GSDMCQ9BYG8 508 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 GOLGA6AQ9NYA3 693 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 APPL1Q9UKG1 709 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 ENTPD2Q9Y5L3 495 aa18.15■□□□□ 0.5
VCX3A-203ENST00000612369 TMX2-CTNND1H3BSU7 103 aa18.14■□□□□ 0.49
VCX3A-203ENST00000612369 TLX3O43711 291 aaPredicted RBP18.14■□□□□ 0.49
VCX3A-203ENST00000612369 IVLP07476 585 aa18.14■□□□□ 0.49
VCX3A-203ENST00000612369 ZNF75DP51815 510 aa18.14■□□□□ 0.49
VCX3A-203ENST00000612369 ERVPABLB-1P60509 514 aa18.14■□□□□ 0.49
VCX3A-203ENST00000612369 GABREP78334 506 aa18.14■□□□□ 0.49
VCX3A-203ENST00000612369 QPCTQ16769 361 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms