RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 GPR1P46091 355 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 VAV2P52735 878 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 INSM1Q01101 510 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-219ENST00000580540 ADCY2Q08462 1091 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 GALNT3Q14435 633 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 PCSK7Q16549 785 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 EFL1Q7Z2Z2 1120 aaKnown RBP16.61■□□□□ 0.25
SREBF1-219ENST00000580540 HEATR4Q86WZ0 1026 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 GKN2Q86XP6 184 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 CBARPQ8N350 705 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-219ENST00000580540 EXD1Q8NHP7 514 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 MDM1Q8TC05 714 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 KIAA1524Q8TCG1 905 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 AP2M1Q96CW1 435 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 TBATAQ96M53 351 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 DESI2Q9BSY9 194 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 MLPHQ9BV36 600 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-219ENST00000580540 CCDC86Q9H6F5 360 aaKnown RBP16.61■□□□□ 0.25
SREBF1-219ENST00000580540 USP29Q9HBJ7 922 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 NCKIPSDQ9NZQ3 722 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 IMPACTQ9P2X3 320 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 U3KQA8 63 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 C1orf232A0A0U1RR37 186 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 CAPN8A6NHC0 703 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 HOXC4P09017 264 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-219ENST00000580540 MYCLP1P12525 358 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-219ENST00000580540 ZNF30P17039 623 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 CDC25BP30305 580 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 RPIAP49247 311 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 RPL26P61254 145 aaKnown RBP16.6■□□□□ 0.25
SREBF1-219ENST00000580540 PTSQ03393 145 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 QPCTQ16769 361 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 TEX44Q53QW1 395 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 C6orf132Q5T0Z8 1188 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 GUSBP11Q6P575 273 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 DOK6Q6PKX4 331 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 TECPR1Q7Z6L1 1165 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 TAF8Q7Z7C8 310 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 SLC35F3Q8IY50 421 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 PDCD7Q8N8D1 485 aaKnown RBP16.6■□□□□ 0.25
SREBF1-219ENST00000580540 MAPK15Q8TD08 544 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 SCAMP4Q969E2 229 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 CALR3Q96L12 384 aaKnown RBP16.6■□□□□ 0.25
SREBF1-219ENST00000580540 BOCQ9BWV1 1114 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 ADGRE3Q9BY15 652 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 SLC25A51Q9H1U9 297 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 ABCG8Q9H221 673 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 GLOD4Q9HC38 313 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 DNPEPQ9ULA0 475 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 RPL26L1Q9UNX3 145 aaKnown RBP16.6■□□□□ 0.25
SREBF1-219ENST00000580540 GPR34Q9UPC5 381 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 CLCA2Q9UQC9 943 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 DGKBQ9Y6T7 804 aa16.6■□□□□ 0.25
SREBF1-219ENST00000580540 CACNA1BQ00975 2339 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 MACROD2A1Z1Q3 448 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 ANKRD66B4E2M5 251 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 F5H423 210 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-219ENST00000580540 TNFRSF10CO14798 259 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 OPA1O60313 960 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 MT-CO3P00414 261 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 PTPN3P26045 913 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 STC1P52823 247 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 CDK3Q00526 305 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 CYP4F3Q08477 520 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 KIF5AQ12840 1032 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 PRKD1Q15139 912 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-219ENST00000580540 SPATA22Q8NHS9 363 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 IMP4Q96G21 291 aaKnown RBP16.59■□□□□ 0.25
SREBF1-219ENST00000580540 RIOK2Q9BVS4 552 aaKnown RBP16.59■□□□□ 0.25
SREBF1-219ENST00000580540 TEX101Q9BY14 249 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 TMEM168Q9H0V1 697 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 SYNDIG1Q9H7V2 258 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 CARS2Q9HA77 564 aaKnown RBP16.59■□□□□ 0.25
SREBF1-219ENST00000580540 UBP1Q9NZI7 540 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 KLHL8Q9P2G9 620 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-219ENST00000580540 PADI4Q9UM07 663 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 PCDHA3Q9Y5H8 950 aa16.59■□□□□ 0.25
SREBF1-219ENST00000580540 PRSS38A1L453 326 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 BTNL10A8MVZ5 291 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 H7C0C1 242 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 PJA2O43164 708 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 PMPCBO75439 489 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 KRT37O76014 449 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 MT-CYBP00156 380 aaPredicted RBP16.58■□□□□ 0.24
SREBF1-219ENST00000580540 SLC4A1P02730 911 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 GP1BAP07359 652 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 PIRTP0C851 137 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 CTNNA1P35221 906 aaKnown RBP16.58■□□□□ 0.24
SREBF1-219ENST00000580540 GNPDA1P46926 289 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 ATP5OP48047 213 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 POLD2P49005 469 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 CAMK2BQ13554 666 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 PPP2R5EQ16537 467 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 CCDC70Q6NSX1 233 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 LVRNQ6Q4G3 990 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 TMEM139Q8IV31 216 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 TXLNBQ8N3L3 684 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 KYQ8NBH2 561 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 FAM46DQ8NEK8 389 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 CCHCR1Q8TD31 782 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms