RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 DMAP1Q9NPF5 467 aaPredicted RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 ARHGEF38Q9NXL2 777 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 RAP2CQ9Y3L5 183 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 PTPRFP10586 1907 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 PCNTO95613 3336 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 LOC100289279A0A1B0GTE1 492 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 IQCA1LA6NCM1 817 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 CABYRO75952 493 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 APOA4P06727 396 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 HMBSP08397 361 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 PAMP19021 973 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 TSPAN8P19075 237 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 CD52P31358 61 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 PURAQ00577 322 aaKnown RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 CCNIQ14094 377 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 PCID2Q5JVF3 399 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 SH2D4BQ5SQS7 431 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 MAP3K21Q5TCX8 1036 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 ARMC3Q5W041 872 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 KIAA1211LQ6NV74 962 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 PKN3Q6P5Z2 889 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 DCLRE1AQ6PJP8 1040 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 EPGNQ6UW88 154 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 LAYNQ6UX15 382 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 PTAR1Q7Z6K3 402 aaPredicted RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 SPATA2LQ8IUW3 424 aaPredicted RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 MRPL41Q8IXM3 137 aaKnown RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 THEM5Q8N1Q8 247 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 GALNT4Q8N4A0 578 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 SNX31Q8N9S9 440 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 PPP2R3CQ969Q6 453 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 PHF21BQ96EK2 531 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 FCRL2Q96LA5 508 aaPredicted RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 TUBGCP5Q96RT8 1024 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 KLHL4Q9C0H6 718 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 SLC39A8Q9C0K1 460 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 GLOD4Q9HC38 313 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 NT5MQ9NPB1 228 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 OXSMQ9NWU1 459 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 RRN3Q9NYV6 651 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 ZDHHC2Q9UIJ5 367 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 SF3B1O75533 1304 aaKnown RBP eCLIP5.38□□□□□ -1.55
VAPA-203ENST00000577539 PAPPA2Q9BXP8 1791 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 TMEM114B3SHH9 223 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 STX16-NPEPL1H3BU86 382 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 PSMD3O43242 534 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 BUD23O43709 281 aaKnown RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 CD151P48509 253 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 CXCR3P49682 368 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 AIF1P55008 147 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 GEMP55040 296 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 AQP4P55087 323 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 SFT2D3Q587I9 215 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 RNFT1Q5M7Z0 435 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 LRRC8EQ6NSJ5 796 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 NEPROQ6NW34 567 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 TAF2Q6P1X5 1199 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 AAGABQ6PD74 315 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 SLC30A9Q6PML9 568 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 ZYG11AQ6WRX3 759 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 RPS27LQ71UM5 84 aaKnown RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 LDB1Q86U70 411 aaPredicted RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 ST13P4Q8IZP2 240 aaPredicted RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 FBXW8Q8N3Y1 598 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 PCDH20Q8N6Y1 951 aaKnown RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 NKAIN3Q8N8D7 197 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 ICA1LQ8NDH6 482 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 ACTRT2Q8TDY3 377 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 JADE3Q92613 823 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 KLHL5Q96PQ7 755 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 GORASP1Q9BQQ3 440 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 SYT17Q9BSW7 474 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 TRIM4Q9C037 500 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 CATSPERBQ9H7T0 1116 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 INTS7Q9NVH2 962 aaKnown RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 TMLHEQ9NVH6 421 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 NSMCE4AQ9NXX6 385 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 IPO11Q9UI26 975 aaKnown RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 ADAMTS6Q9UKP5 1117 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 FBXO5Q9UKT4 447 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 PRG3Q9Y2Y8 225 aaPredicted RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 DTNAQ9Y4J8 743 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 TRPV2Q9Y5S1 764 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 RGSL1A5PLK6 1076 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 MYADML2A6NDP7 307 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 CAPN8A6NHC0 703 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 K7ESF4 209 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 DLX3O60479 287 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 EPHX1P07099 455 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 ZNF865P0CJ78 1059 aaPredicted RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 MYCLP1P12525 358 aaPredicted RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 CCR1P32246 355 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 ADH7P40394 386 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 HCAR3P49019 387 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 HUNKP57058 714 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 RAB10P61026 200 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 SEMA3BQ13214 749 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 ITGA7Q13683 1181 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 XKR4Q5GH76 650 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 KCTD11Q693B1 232 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms