RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 UBXN10Q96LJ8 280 aa24.64■■□□□ 1.54
DHFR-203ENST00000505337 MRPL57Q9BQC6 102 aaKnown RBP24.64■■□□□ 1.54
DHFR-203ENST00000505337 NMUR2Q9GZQ4 415 aa24.64■■□□□ 1.54
DHFR-203ENST00000505337 TCF20Q9UGU0 1960 aaKnown RBP24.64■■□□□ 1.54
DHFR-203ENST00000505337 TTC28Q96AY4 2481 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 CXorf51AA0A1B0GTR3 108 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 C2orf81A6NN90 581 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 FCHO1O14526 889 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 LPOP22079 712 aaPredicted RBP24.64■■□□□ 1.53
DHFR-203ENST00000505337 CD70P32970 193 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 PLK1P53350 603 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 ZBTB16Q05516 673 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 TEAD2Q15562 447 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 TTC7BQ86TV6 843 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 INPP5DQ92835 1189 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 EBF4Q9BQW3 602 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 FAM96AQ9H5X1 160 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 GPAMQ9HCL2 828 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 INTS10Q9NVR2 710 aaKnown RBP24.64■■□□□ 1.53
DHFR-203ENST00000505337 POLR3BQ9NW08 1133 aaPredicted RBP24.64■■□□□ 1.53
DHFR-203ENST00000505337 HAO1Q9UJM8 370 aa24.64■■□□□ 1.53
DHFR-203ENST00000505337 INTS6Q9UL03 887 aaKnown RBP24.64■■□□□ 1.53
DHFR-203ENST00000505337 C5orf42Q9H799 3197 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 ZNF195O14628 629 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 SMAD6O43541 496 aaKnown RBP24.63■■□□□ 1.53
DHFR-203ENST00000505337 DLX3O60479 287 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 CLASP2O75122 1294 aaKnown RBP24.63■■□□□ 1.53
DHFR-203ENST00000505337 LTA4HP09960 611 aaKnown RBP24.63■■□□□ 1.53
DHFR-203ENST00000505337 PTPN2P17706 415 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 SLC26A3P40879 764 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 SUOXP51687 545 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 TUBB3Q13509 450 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 CSHL1Q14406 222 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 SLC5A9Q2M3M2 681 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 PTCRAQ6ISU1 281 aaPredicted RBP24.63■■□□□ 1.53
DHFR-203ENST00000505337 TMEM184AQ6ZMB5 413 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 SPATA6LQ8N4H0 392 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 SLC7A6OSQ96CW6 309 aaPredicted RBP24.63■■□□□ 1.53
DHFR-203ENST00000505337 ABCB8Q9NUT2 735 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 PNPOQ9NVS9 261 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 HACD3Q9P035 362 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 LNPEPQ9UIQ6 1025 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 CUL9Q8IWT3 2517 aa24.63■■□□□ 1.53
DHFR-203ENST00000505337 GRXCR2A6NFK2 248 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 TRAFD1O14545 582 aaPredicted RBP24.62■■□□□ 1.53
DHFR-203ENST00000505337 RHOP08100 348 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 SLC8A1P32418 973 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 GRIA4P48058 902 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 CSNK1DP48730 415 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 KRT72Q14CN4 511 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 FAM83EQ2M2I3 478 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 METTL3Q86U44 580 aaKnown RBP24.62■■□□□ 1.53
DHFR-203ENST00000505337 PACS2Q86VP3 889 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 KIF2BQ8N4N8 673 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 PDCD6IPQ8WUM4 868 aaKnown RBP24.62■■□□□ 1.53
DHFR-203ENST00000505337 MYO19Q96H55 970 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 TMEM237Q96Q45 408 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 TM6SF2Q9BZW4 377 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 DRC3Q9H069 523 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 DNAJC28Q9NX36 388 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 CRYL1Q9Y2S2 319 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 C2orf16Q68DN1 1984 aa24.62■■□□□ 1.53
DHFR-203ENST00000505337 HNRNPCL1O60812 293 aaKnown RBP24.61■■□□□ 1.53
DHFR-203ENST00000505337 HSPA4LO95757 839 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 CYBBP04839 570 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 IL9P15248 144 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 EPCAMP16422 314 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 TIAL1Q01085 375 aaKnown RBP eCLIP24.61■■□□□ 1.53
DHFR-203ENST00000505337 AGAP9Q5VTM2 703 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 CYB5D1Q6P9G0 228 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 ZNF781Q8N8C0 355 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 LEMD2Q8NC56 503 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 ANKRD49Q8WVL7 239 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 USP13Q92995 863 aaPredicted RBP24.61■■□□□ 1.53
DHFR-203ENST00000505337 PTCD3Q96EY7 689 aaKnown RBP24.61■■□□□ 1.53
DHFR-203ENST00000505337 NECAB3Q96P71 396 aaPredicted RBP24.61■■□□□ 1.53
DHFR-203ENST00000505337 POPDC3Q9HBV1 291 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 SOBPA7XYQ1 873 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 H7C0S8 307 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 PGLSO95336 258 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 PRSS56P0CW18 603 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 ELF3P78545 371 aaPredicted RBP24.61■■□□□ 1.53
DHFR-203ENST00000505337 RCN2Q14257 317 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 TTC31Q49AM3 519 aaPredicted RBP24.61■■□□□ 1.53
DHFR-203ENST00000505337 ARHGAP15Q53QZ3 475 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 PRSS36Q5K4E3 855 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 TMEM207Q6UWW9 146 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 SDCCAG8Q86SQ7 713 aaPredicted RBP24.61■■□□□ 1.53
DHFR-203ENST00000505337 PIM3Q86V86 326 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 SPNS2Q8IVW8 549 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 UNKQ9C0B0 810 aaKnown RBP24.61■■□□□ 1.53
DHFR-203ENST00000505337 CDH19Q9H159 772 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 ARL8BQ9NVJ2 186 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 PCDHB9Q9Y5E1 797 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 HCFC2Q9Y5Z7 792 aa24.61■■□□□ 1.53
DHFR-203ENST00000505337 ZNF821O75541 412 aaPredicted RBP24.6■■□□□ 1.53
DHFR-203ENST00000505337 PENKP01210 267 aaPredicted RBP24.6■■□□□ 1.53
DHFR-203ENST00000505337 SLC4A1P02730 911 aa24.6■■□□□ 1.53
DHFR-203ENST00000505337 HNRNPA1P09651 372 aaKnown RBP eCLIP24.6■■□□□ 1.53
DHFR-203ENST00000505337 CCDC166P0CW27 439 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms