RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 NCAPHQ15003 741 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 PPP1R2P3Q6NXS1 205 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 ZNF571Q7Z3V5 609 aaPredicted RBP17.1■□□□□ 0.33
FAM20B-202ENST00000440702 TSPAN33Q86UF1 283 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 HSPH1Q92598 858 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 DTD2Q96FN9 168 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 CCDC74BQ96LY2 380 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 FRMD8Q9BZ67 464 aaPredicted RBP17.1■□□□□ 0.33
FAM20B-202ENST00000440702 ZMYND15Q9H091 742 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 HAUS4Q9H6D7 363 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 ZWILCHQ9H900 591 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 AKAP7Q9P0M2 348 aaPredicted RBP17.1■□□□□ 0.33
FAM20B-202ENST00000440702 SOCS5O75159 536 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 WISP1O95388 367 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 CPNE6O95741 557 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 CYP2A6P11509 494 aaPredicted RBP17.09■□□□□ 0.33
FAM20B-202ENST00000440702 TCF4P15884 667 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 CTPS1P17812 591 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 IL1R2P27930 398 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 ARL4AP40617 200 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 PPM1FP49593 454 aaPredicted RBP17.09■□□□□ 0.33
FAM20B-202ENST00000440702 CDK3Q00526 305 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 NKAIN2Q5VXU1 208 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 E4F1Q66K89 784 aaPredicted RBP17.09■□□□□ 0.33
FAM20B-202ENST00000440702 TMCO3Q6UWJ1 677 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 Q6ZVL8 140 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 ZSCAN1Q8NBB4 408 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 FNIP1Q8TF40 1166 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 PMEPA1Q969W9 287 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 ZNF599Q96NL3 588 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 NUDCD1Q96RS6 583 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 TEX101Q9BY14 249 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 CD84Q9UIB8 345 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 PLEKHM1Q9Y4G2 1056 aa17.09■□□□□ 0.33
FAM20B-202ENST00000440702 IGHV5-10-1A0A0J9YXX1 117 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 A0A1W2PQC6 194 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 LRRC10BA6NIK2 292 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 PEX11BO96011 259 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 CR2P20023 1033 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 MPSTP25325 297 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 HCAR3P49019 387 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 CTBSQ01459 385 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 TBR1Q16650 682 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 ZNF574Q6ZN55 896 aaPredicted RBP17.08■□□□□ 0.32
FAM20B-202ENST00000440702 RFLNAQ6ZTI6 216 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 ZNF438Q7Z4V0 828 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 TRIM74Q86UV6 250 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 PSTKQ8IV42 348 aaKnown RBP17.08■□□□□ 0.32
FAM20B-202ENST00000440702 ATPAF2Q8N5M1 289 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 LZTR1Q8N653 840 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 HTR3CQ8WXA8 447 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 SMIM14Q96QK8 99 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 MGME1Q9BQP7 344 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.08■□□□□ 0.32
FAM20B-202ENST00000440702 TMEM98Q9Y2Y6 226 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 ST14Q9Y5Y6 855 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 SCINQ9Y6U3 715 aa17.08■□□□□ 0.32
FAM20B-202ENST00000440702 CYSRT1A8MQ03 144 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 DDX3XO00571 662 aaKnown RBP eCLIP17.07■□□□□ 0.329e-12■■■■■ 29.6
FAM20B-202ENST00000440702 ITGB2P05107 769 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 CD1CP29017 333 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 HSPA9P38646 679 aaKnown RBP17.07■□□□□ 0.32
FAM20B-202ENST00000440702 ADCY8P40145 1251 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 ACTR1BP42025 376 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 ZNF135P52742 658 aaPredicted RBP17.07■□□□□ 0.32
FAM20B-202ENST00000440702 ACTR1AP61163 376 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 TMEM164Q5U3C3 297 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 CLEC17AQ6ZS10 378 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 USP45Q70EL2 814 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 MARK2Q7KZI7 788 aaKnown RBP17.07■□□□□ 0.32
FAM20B-202ENST00000440702 C17orf82Q86X59 251 aaPredicted RBP17.07■□□□□ 0.32
FAM20B-202ENST00000440702 ZNF761Q86XN6 746 aaPredicted RBP17.07■□□□□ 0.32
FAM20B-202ENST00000440702 DTX1Q86Y01 620 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 NAGSQ8N159 534 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 BBS5Q8N3I7 341 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.07■□□□□ 0.32
FAM20B-202ENST00000440702 CSPG4P5Q96PW8 444 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 NT5MQ9NPB1 228 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 TRNAU1APQ9NX07 287 aaKnown RBP17.07■□□□□ 0.32
FAM20B-202ENST00000440702 TMEM9Q9P0T7 183 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 MYO6Q9UM54 1294 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 PHTF1Q9UMS5 762 aa17.07■□□□□ 0.32
FAM20B-202ENST00000440702 TRBV23OR9-2A0A075B6M9 112 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 A0A1W2PQ67 120 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 STMND1H3BQB6 276 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 MAFKO60675 156 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 PGLSO95336 258 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 FGF3P11487 239 aaPredicted RBP17.06■□□□□ 0.32
FAM20B-202ENST00000440702 SKILP12757 684 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 NFKBIAP25963 317 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 CD82P27701 267 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 CSF2RBP32927 897 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 MMP13P45452 471 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 GPR1P46091 355 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 KLHL30Q0D2K2 578 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 DPYSL2Q16555 572 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 ARMC12Q5T9G4 340 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 TXNRD3NBQ6F5E7 133 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 POLNQ7Z5Q5 900 aa17.06■□□□□ 0.32
FAM20B-202ENST00000440702 NSMCE1Q8WV22 266 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms