RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 RNF19BQ6ZMZ0 732 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 KCTD8Q6ZWB6 473 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 PSTKQ8IV42 348 aaKnown RBP17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 TOP6BLQ8N6T0 577 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 NT5C3BQ969T7 300 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 HOXD1Q9GZZ0 328 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 RNF38Q9H0F5 515 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 SOX17Q9H6I2 414 aaPredicted RBP17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 ZSWIM8A7E2V4 1837 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 ZCWPW2A0A1B0GU75 182 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 LOC105371267A0A1B0GV96 52 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 SOCS2O14508 198 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 GABRDO14764 452 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 RGS13O14921 159 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 GJB3O75712 270 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 TGM1P22735 817 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 BMPR1AP36894 532 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 GLUD2P49448 558 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 GRM3Q14832 879 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 GK5Q6ZS86 529 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 LDB1Q86U70 411 aaPredicted RBP17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 SLC39A3Q9BRY0 314 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 BFARQ9NZS9 450 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 KLQ9UEF7 1012 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 TNPO2O14787 897 aaKnown RBP17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 ALDH1A2O94788 518 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 NR4A2P43354 598 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 CPT1AP50416 773 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 IFITM3Q01628 133 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 NEDD8Q15843 81 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 MORN1Q5T089 497 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 KCNMB4Q86W47 210 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 OFCC1Q8IZS5 231 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 CLIP4Q8N3C7 705 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 SH3YL1Q96HL8 342 aaPredicted RBP17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 SCYL1Q96KG9 808 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 SLC2A13Q96QE2 648 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 PCDH12Q9NPG4 1184 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 KCNU1A8MYU2 1149 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 CLDN25C9JDP6 229 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 C2P06681 752 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 GLDCP23378 1020 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 RPL34P49207 117 aaKnown RBP17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 HARS2P49590 506 aaKnown RBP17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 ATP6V0D1P61421 351 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 HMBOX1Q6NT76 420 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 BHLHA9Q7RTU4 235 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 SLC41A1Q8IVJ1 513 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 MINDY2Q8NBR6 621 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 MARCH7Q9H992 704 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 SCUBE2Q9NQ36 999 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 SMOXQ9NWM0 555 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 QPCTLQ9NXS2 382 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 PCDHGA11Q9Y5H2 935 aa17.31■□□□□ 0.36
LDLRAP1-201ENST00000374338 ZNF839A8K0R7 811 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 B4GALT3O60512 393 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 ADSLP30566 484 aaPredicted RBP17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 GP5P40197 560 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 SERPINB9P50453 376 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 PTK2BQ14289 1009 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 CHSY3Q70JA7 882 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 UTS2BQ765I0 119 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 NAT16Q8N8M0 369 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 ZNF486Q96H40 463 aaPredicted RBP17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 RPL10LQ96L21 214 aaKnown RBP17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 GATA5Q9BWX5 397 aaPredicted RBP17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 TASP1Q9H6P5 420 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 HAS3O00219 553 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 TBX18O95935 607 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 HMBSP08397 361 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 MYF6P23409 242 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 GRK2P25098 689 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 GARSP41250 739 aaKnown RBP17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 CSE1LP55060 971 aaKnown RBP17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 ARPP19P56211 112 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 MRPS6P82932 125 aaKnown RBP17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 ZNF846Q147U1 533 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 PAFAH1B3Q15102 231 aaKnown RBP17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 XKR4Q5GH76 650 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 PPP4R4Q6NUP7 873 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 ESRP1Q6NXG1 681 aaKnown RBP17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 ANKRD13BQ86YJ7 626 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 HERC6Q8IVU3 1022 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 PDPRQ8NCN5 879 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 ABHD11Q8NFV4 315 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 RP9Q8TA86 221 aaKnown RBP17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 KCTD4Q8WVF5 259 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 SLCO4A1Q96BD0 722 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 SPATA17Q96L03 361 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 MTG1Q9BT17 334 aaPredicted RBP17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 PCDHB12Q9Y5F1 795 aa17.3■□□□□ 0.36
LDLRAP1-201ENST00000374338 NEMP2A6NFY4 417 aa17.29■□□□□ 0.36
LDLRAP1-201ENST00000374338 HACD1B0YJ81 288 aa17.29■□□□□ 0.36
LDLRAP1-201ENST00000374338 HHLA1C9JL84 531 aa17.29■□□□□ 0.36
LDLRAP1-201ENST00000374338 E7ENX8 843 aa17.29■□□□□ 0.36
LDLRAP1-201ENST00000374338 M0QZ92 97 aa17.29■□□□□ 0.36
LDLRAP1-201ENST00000374338 AP2A1O95782 977 aa17.29■□□□□ 0.36
LDLRAP1-201ENST00000374338 MT-CO1P00395 513 aa17.29■□□□□ 0.36
LDLRAP1-201ENST00000374338 TSPY1Q01534 308 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms