RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 MDM4O15151 490 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 AP1S2P56377 157 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 MPPE1Q53F39 396 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 MAP1SQ66K74 1059 aaPredicted RBP16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 CUZD1Q86UP6 607 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 SETD6Q8TBK2 473 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 FAM110BQ8TC76 370 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 GTPBP3Q969Y2 492 aaKnown RBP16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 ARMC5Q96C12 935 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 CCDC28BQ9BUN5 200 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 ZNF221Q9UK13 617 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 NFASCO94856 1347 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 CROCC2H7BZ55 1655 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 SLC28A1O00337 649 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 ACKR2O00590 384 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 SLC22A3O75751 556 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 PRLP01236 227 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 CATP04040 527 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 ERBB2P04626 1255 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 IGFBP4P22692 258 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 RAB25P57735 213 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 USF2Q15853 346 aaPredicted RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 MRPL57Q9BQC6 102 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 S100A14Q9HCY8 104 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 NCKAP1Q9Y2A7 1128 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 hCG_2039718K7EN88 272 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 PAEPP09466 180 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 TLX1P31314 330 aaPredicted RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 AKT2P31751 481 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 ACVR2BQ13705 512 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 OCLNQ16625 522 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 C9orf131Q5VYM1 1079 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 STYK1Q6J9G0 422 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 ZNF563Q8TA94 476 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 AZIN2Q96A70 460 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 CXorf40BQ96DE9 158 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 ASB2Q96Q27 587 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 GPER1Q99527 375 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 GBA2Q9HCG7 927 aaPredicted RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 BAIAP2Q9UQB8 552 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 TBC1D30Q9Y2I9 924 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 MLYCDO95822 493 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 ZNF143P52747 638 aaPredicted RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 HELQQ8TDG4 1101 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 CSGALNACT1Q8TDX6 532 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 PMEPA1Q969W9 287 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 DIRAS2Q96HU8 199 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 VCPIP1Q96JH7 1222 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 RACGAP1Q9H0H5 632 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 NEK6Q9HC98 313 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 FRMPD4Q14CM0 1322 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 hCG_1818297A0A087WSY0 165 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 CCNDBP1O95273 360 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 ATP5C1P36542 298 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 ECM1Q16610 540 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 GFOD2Q3B7J2 385 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 NT5DC1Q5TFE4 455 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 THOC7Q6I9Y2 204 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 RFWD3Q6PCD5 774 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 FAM129CQ86XR2 697 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 ITCHQ96J02 903 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 SGK2Q9HBY8 427 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 THG1LQ9NWX6 298 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 FADS3Q9Y5Q0 445 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 HDAC3O15379 428 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 ZNF806P0C7X5 589 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 TKTP29401 623 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 PSEN2P49810 448 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 CDK9P50750 372 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 AFTPHQ6ULP2 937 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 PIGZQ86VD9 579 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 CHST4Q8NCG5 386 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 SP140LQ9H930 580 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 MRPL17Q9NRX2 175 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 PCYOX1Q9UHG3 505 aa16.79■□□□□ 0.28
TSPAN3-201ENST00000267970 GSC2O15499 205 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 SERPINA3P01011 423 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 PTGS2P35354 604 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 DUPD1Q68J44 220 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 RBM15BQ8NDT2 890 aaKnown RBP16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 SLC9A6Q92581 669 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 UXTQ9UBK9 157 aaPredicted RBP16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 RPTORQ8N122 1335 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 RALGPS1Q5JS13 557 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 SMARCD3Q6STE5 483 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 NKAPQ8N5F7 415 aaKnown RBP16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 CDK5RAP1Q96SZ6 601 aaKnown RBP16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 EBNA1BP2Q99848 306 aaKnown RBP16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 PTPN18Q99952 460 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 FEM1AQ9BSK4 669 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 FAM240BA0A1B0GVZ2 78 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 GNB5O14775 395 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 DCLK1O15075 740 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 COL6A1P12109 1028 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 TMPRSS11BQ86T26 416 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 MAP4K3Q8IVH8 894 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 SLC4A11Q8NBS3 891 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 NXNL1Q96CM4 212 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms