RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 BTN3A3O00478 584 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 USP46P62068 366 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 CPSF6Q16630 551 aaKnown RBP eCLIP11.09□□□□□ -0.63
KNOP1-201ENST00000219837 GALNT13Q8IUC8 556 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 DEPDC4Q8N2C3 294 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 UBR7Q8N806 425 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 PNPT1Q8TCS8 783 aaKnown RBP11.09□□□□□ -0.63
KNOP1-201ENST00000219837 AIF1LQ9BQI0 150 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 BLOC1S4Q9NUP1 217 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 ING3Q9NXR8 418 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 MDM4O15151 490 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 KCNA5P22460 613 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 DDR1Q08345 913 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 ESRP1Q6NXG1 681 aaKnown RBP11.09□□□□□ -0.63
KNOP1-201ENST00000219837 GALNT18Q6P9A2 607 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 FBXO15Q8NCQ5 510 aaPredicted RBP11.09□□□□□ -0.63
KNOP1-201ENST00000219837 CLHC1Q8NHS4 586 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
KNOP1-201ENST00000219837 DLG3Q92796 817 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 HSFY1Q96LI6 401 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 ZNF670Q9BS34 389 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 SPATA9Q9BWV2 254 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 PLK2Q9NYY3 685 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 STBD1O95210 358 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 PAX3P23760 479 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 CMPK1P30085 196 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 ARHGDIBP52566 201 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 LSM3P62310 102 aaKnown RBP11.09□□□□□ -0.63
KNOP1-201ENST00000219837 NOGQ13253 232 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 HEXDCQ8WVB3 486 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 PMEPA1Q969W9 287 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 C5orf34Q96MH7 638 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 KCTD15Q96SI1 283 aaPredicted RBP11.09□□□□□ -0.63
KNOP1-201ENST00000219837 TSPAN18Q96SJ8 248 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 NCANO14594 1321 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 HNRNPLP14866 589 aaKnown RBP eCLIP11.09□□□□□ -0.63
KNOP1-201ENST00000219837 RPL22P35268 128 aaKnown RBP11.09□□□□□ -0.63
KNOP1-201ENST00000219837 SSR2P43308 183 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 SEMA5AQ13591 1074 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 CAPN13Q6MZZ7 669 aaPredicted RBP11.09□□□□□ -0.63
KNOP1-201ENST00000219837 ARHGAP36Q6ZRI8 547 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.09□□□□□ -0.63
KNOP1-201ENST00000219837 ADAMTSL2Q86TH1 951 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 TMEM161BQ8NDZ6 487 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 KBTBD7Q8WVZ9 684 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 PIH1D2Q8WWB5 315 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 DNASE1L2Q92874 299 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 ERGIC3Q9Y282 383 aa11.09□□□□□ -0.63
KNOP1-201ENST00000219837 E9PAM4 449 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 H3BM21 787 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 FPGTO14772 594 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 TGFBR2P37173 567 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 RFX4Q33E94 735 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 C9orf64Q5T6V5 341 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 ZNF730Q6ZMV8 503 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 C17orf64Q86WR6 236 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 RDH11Q8TC12 318 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 ARNTL2Q8WYA1 636 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 SNX15Q9NRS6 342 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 CLEC4AQ9UMR7 237 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 DERAQ9Y315 318 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 ADAMTS13Q76LX8 1427 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 XKRYO14609 159 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 NFATC1O95644 943 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 MASP1P48740 699 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 PPP2R2DQ66LE6 453 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 GALNT7Q86SF2 657 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 ALYREFQ86V81 257 aaKnown RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 CADM2Q8N3J6 435 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 GLIS3Q8NEA6 775 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 ZNF483Q8TF39 744 aaPredicted RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 CDH19Q9H159 772 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 PRDM8Q9NQV8 689 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 SAR1AQ9NR31 198 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 PHPT1Q9NRX4 125 aaPredicted RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 AFDNP55196 1824 aaKnown RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 STX16-NPEPL1H3BU86 382 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 PSMD9O00233 223 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 STX16O14662 325 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 RPP40O75818 363 aaKnown RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 FLT3LGP49771 235 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 ANKRD23Q86SG2 305 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 EPS8L1Q8TE68 723 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 SMG7Q92540 1137 aaKnown RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 TP53INP1Q96A56 240 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 KAZALD1Q96I82 304 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 AGO3Q9H9G7 860 aaKnown RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 GOLGA2P5Q9HBQ8 144 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 CHMP1AQ9HD42 196 aaPredicted RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 MRPS33Q9Y291 106 aaKnown RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 RWDD3Q9Y3V2 267 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 C2CD2Q9Y426 696 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 PTCH2Q9Y6C5 1203 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 SMIM35A0A1B0GVV1 85 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 SEPT4O43236 478 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 MATKP42679 507 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 PTPN9P43378 593 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 SMCO1Q147U7 214 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 TIMM50Q3ZCQ8 353 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 BROXQ5VW32 411 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms