RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 A0A0J9YYE9 177 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 CPED1A4D0V7 1026 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 APOL1O14791 398 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 PRLP01236 227 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 TRBC1P01850 177 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 ZNF30P17039 623 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 COMTP21964 271 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 CA4P22748 312 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 NR2C2P49116 596 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 ZNF75DP51815 510 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 DSC2Q02487 901 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 PTSQ03393 145 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 NIPAL4Q0D2K0 466 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 ARHGEF7Q14155 803 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 SPA17Q15506 151 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 CDKN3Q16667 212 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 GUSBP11Q6P575 273 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 CRTC1Q6UUV9 634 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 Q6ZVL8 140 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 RD3Q7Z3Z2 195 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 GKN2Q86XP6 184 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 SLC35F3Q8IY50 421 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 CNTD1Q8N815 330 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 WDR48Q8TAF3 677 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.52□□□□□ -0.73
CCDC9-203ENST00000596938 OR1E3Q8WZA6 343 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 NAT6Q93015 286 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 RNF25Q96BH1 459 aaPredicted RBP10.52□□□□□ -0.73
CCDC9-203ENST00000596938 GRAMD1AQ96CP6 724 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 NXPE2Q96DL1 559 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 NUS1Q96E22 293 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 PANX2Q96RD6 677 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 LYSMD1Q96S90 227 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 LGR4Q9BXB1 951 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 TDRD1Q9BXT4 1180 aaKnown RBP10.52□□□□□ -0.73
CCDC9-203ENST00000596938 RBSNQ9H1K0 784 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 DNPEPQ9ULA0 475 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 PADI4Q9UM07 663 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 DOLKQ9UPQ8 538 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 PCDHA13Q9Y5I0 950 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 HEY1Q9Y5J3 304 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 ALG6Q9Y672 507 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 DOCK9Q9BZ29 2069 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 CHD6Q8TD26 2715 aa10.52□□□□□ -0.73
CCDC9-203ENST00000596938 ARID1BQ8NFD5 2236 aaPredicted RBP10.52□□□□□ -0.73
CCDC9-203ENST00000596938 CELSR3Q9NYQ7 3312 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 ANKRD66B4E2M5 251 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 KCNK1O00180 336 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 PSTPIP1O43586 416 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 SPOPO43791 374 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 KRT1P04264 644 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 HLA-DQB2P05538 268 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 CEACAM5P06731 702 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 CELA2BP08218 269 aaPredicted RBP10.51□□□□□ -0.73
CCDC9-203ENST00000596938 MMP2P08253 660 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 MYCLP1P12525 358 aaPredicted RBP10.51□□□□□ -0.73
CCDC9-203ENST00000596938 CTPS1P17812 591 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 FECHP22830 423 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 CYLC1P35663 651 aaPredicted RBP10.51□□□□□ -0.73
CCDC9-203ENST00000596938 ETV3P41162 512 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 CDKN2BP42772 138 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 NOP2P46087 812 aaKnown RBP10.51□□□□□ -0.73
CCDC9-203ENST00000596938 EPHB1P54762 984 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 TFDP2Q14188 446 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 PTPRRQ15256 657 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 ODF2Q5BJF6 829 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 DENND2CQ68D51 928 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 KCTD16Q68DU8 428 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 OGFOD3Q6PK18 319 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 MFSD7Q6UXD7 560 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 BZW1Q7L1Q6 419 aaKnown RBP10.51□□□□□ -0.73
CCDC9-203ENST00000596938 ZNF765Q7L2R6 523 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 EFL1Q7Z2Z2 1120 aaKnown RBP10.51□□□□□ -0.73
CCDC9-203ENST00000596938 TSPAN33Q86UF1 283 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 NRSN1Q8IZ57 195 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 PELI3Q8N2H9 469 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 ARL10Q8N8L6 244 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 OR6C4Q8NGE1 309 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 MAPK15Q8TD08 544 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 LRRN4Q8WUT4 740 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 PDXPQ96GD0 296 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 CALR3Q96L12 384 aaKnown RBP10.51□□□□□ -0.73
CCDC9-203ENST00000596938 OLFM3Q96PB7 478 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 DEPDC7Q96QD5 511 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 PCDH9Q9HC56 1237 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 FGF22Q9HCT0 170 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 LUC7LQ9NQ29 371 aaKnown RBP10.51□□□□□ -0.73
CCDC9-203ENST00000596938 PHPT1Q9NRX4 125 aaPredicted RBP10.51□□□□□ -0.73
CCDC9-203ENST00000596938 GPR34Q9UPC5 381 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 CHKBQ9Y259 395 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 RAXQ9Y2V3 346 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 GPSM3Q9Y4H4 160 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 HYOU1Q9Y4L1 999 aa10.51□□□□□ -0.73
CCDC9-203ENST00000596938 EPN1Q9Y6I3 576 aaPredicted RBP10.51□□□□□ -0.73
CCDC9-203ENST00000596938 A0A087WV48 116 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 CAPN8A6NHC0 703 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 PPP1R12AO14974 1030 aaPredicted RBP10.5□□□□□ -0.73
CCDC9-203ENST00000596938 TCEA3O75764 348 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 ZRANB2O95218 330 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC9-203ENST00000596938 FUCA1P04066 466 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms