RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 OR2T34Q8NGX1 318 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 DNASE2BQ8WZ79 361 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 FATE1Q969F0 183 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 FUBP1Q96AE4 644 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 ECHDC3Q96DC8 303 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 RBM41Q96IZ5 413 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 LOXL4Q96JB6 756 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 CCDC114Q96M63 670 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 GORASP1Q9BQQ3 440 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 MAK16Q9BXY0 300 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 CPEB1Q9BZB8 566 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 CLEC4MQ9H2X3 399 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 SGK2Q9HBY8 427 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 FZD3Q9NPG1 666 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 SEMA4GQ9NTN9 838 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 RBM22Q9NW64 420 aaKnown RBP eCLIP9.54□□□□□ -0.887e-7■■□□□ 11.9
NPLOC4-219ENST00000576713 RAB23Q9ULC3 237 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 NCKAP1Q9Y2A7 1128 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 ATP8A1Q9Y2Q0 1164 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 SHROOM3Q8TF72 1996 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 PCDH15Q96QU1 1955 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 CEP192Q8TEP8 1941 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 PTPRZ1P23471 2315 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TBC1D3DA0A087WVF3 549 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TBC1D3IA0A087WXS9 549 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TBC1D3EA0A087X179 549 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TBC1D3KA0A087X1G2 549 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 A0A1W2PQU0 124 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 LNP1A1A4G5 178 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TBC1D3FA6NER0 549 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 MIF4GDA9UHW6 222 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TBC1D3LB9A6J9 549 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 F5H423 210 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 GNB5O14775 395 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 RAD51BO15315 384 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 LATO43561 262 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 RNGTTO60942 597 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 PTMAP06454 111 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TBC1D3HP0C7X1 549 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 GM2AP17900 193 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TGM2P21980 687 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 PTPN3P26045 913 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 CD68P34810 354 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 NEK3P51956 506 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 IRX4P78413 519 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TFDP2Q14188 446 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 NOMO1Q15155 1222 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 ZNF284Q2VY69 593 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 RPS26P11Q5JNZ5 115 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 SPDYCQ5MJ68 293 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TBC1D3GQ6DHY5 549 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TBC1D3CQ6IPX1 549 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 ADAT2Q7Z6V5 191 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 PRPF39Q86UA1 669 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 C11orf74Q86VG3 221 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 LRRC49Q8IUZ0 686 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 SYT12Q8IV01 421 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TBC1D3Q8IZP1 549 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 SYCE1Q8N0S2 351 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 BEND7Q8N7W2 519 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 ACTL9Q8TC94 416 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 ATG4AQ8WYN0 398 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 SNX19Q92543 992 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 CRELD1Q96HD1 420 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 SLC6A18Q96N87 628 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 QKIQ96PU8 341 aaKnown RBP eCLIP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 NUDCD1Q96RS6 583 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 MYOCQ99972 504 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 SEMA3CQ99985 751 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 SEPT10Q9P0V9 454 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 GMEB2Q9UKD1 530 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 TTLL3Q9Y4R7 772 aa9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.53□□□□□ -0.88
NPLOC4-219ENST00000576713 MEI4A8MW99 385 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 A8MX80 341 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 H0Y8X5 98 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 LINC01387J3KSC0 135 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 APOC4-APOC2K7ER74 178 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 ENC1O14682 589 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 SLC7A4O43246 635 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 HTRA2O43464 458 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 LRP3O75074 770 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 PRLP01236 227 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 APOC2P02655 101 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 ZNF806P0C7X5 589 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 ESRRAP11474 423 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 ZFXP17010 805 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 RBL1P28749 1068 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 CXCR5P32302 372 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 AP1S1P61966 158 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 BCL2L1Q07817 233 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 PCDH1Q08174 1060 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 RALGDSQ12967 914 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 PDK1Q15118 436 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 SIX1Q15475 284 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 CSRP2Q16527 193 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 UGP2Q16851 508 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 ZNF423Q2M1K9 1284 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 ODF2Q5BJF6 829 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms