RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 K7ESM1 405 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 NEMP1O14524 444 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 TCP1P17987 556 aaKnown RBP15.74■□□□□ 0.11
USB1-208ENST00000563207 HNF1BP35680 557 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 IGFALSP35858 605 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 RGRP47804 291 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 DAB2P98082 770 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 PDE1CQ14123 709 aaPredicted RBP15.74■□□□□ 0.11
USB1-208ENST00000563207 SOWAHCQ53LP3 525 aaPredicted RBP15.74■□□□□ 0.11
USB1-208ENST00000563207 ALG1LQ6GMV1 187 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 KYAT3Q6YP21 454 aaKnown RBP15.74■□□□□ 0.11
USB1-208ENST00000563207 SRLQ86TD4 932 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 ZC3H18Q86VM9 953 aaKnown RBP15.74■□□□□ 0.11
USB1-208ENST00000563207 ZNF548Q8NEK5 533 aaPredicted RBP15.74■□□□□ 0.11
USB1-208ENST00000563207 ZNF641Q96N77 438 aaPredicted RBP15.74■□□□□ 0.11
USB1-208ENST00000563207 QKIQ96PU8 341 aaKnown RBP eCLIP15.74■□□□□ 0.11
USB1-208ENST00000563207 NUDCD1Q96RS6 583 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 ATP13A3Q9H7F0 1226 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 HOMER3Q9NSC5 361 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 RBM22Q9NW64 420 aaKnown RBP eCLIP15.74■□□□□ 0.11
USB1-208ENST00000563207 SNX12Q9UMY4 172 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 CLCA2Q9UQC9 943 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 AK5Q9Y6K8 562 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 KNTC1P50748 2209 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 A0A1W2PQ67 120 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 H7C0C1 242 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 FPGTO14772 594 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 TSPAN6O43657 245 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 CEP104O60308 925 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 GCATO75600 419 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 MT-CO3P00414 261 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 JCHAINP01591 159 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 CSF2P04141 144 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 ATP1A1P05023 1023 aaKnown RBP15.73■□□□□ 0.11
USB1-208ENST00000563207 PRKCGP05129 697 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 RBP3P10745 1247 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 CKMT1AP12532 417 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 CR2P20023 1033 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 ATP5OP48047 213 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 EIF3EP60228 445 aaKnown RBP15.73■□□□□ 0.11
USB1-208ENST00000563207 PFN3P60673 137 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 SGCGQ13326 291 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 C1orf61Q13536 156 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 TCEA2Q15560 299 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 DEFB133Q30KQ1 61 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 TEX44Q53QW1 395 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 ZSWIM9Q86XI8 627 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 CDKL3Q8IVW4 592 aaPredicted RBP15.73■□□□□ 0.11
USB1-208ENST00000563207 RASGEF1CQ8N431 466 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 HTR3CQ8WXA8 447 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 FUBP1Q96AE4 644 aaKnown RBP15.73■□□□□ 0.11
USB1-208ENST00000563207 NSMCE3Q96MG7 304 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 LENG8Q96PV6 779 aaPredicted RBP15.73■□□□□ 0.11
USB1-208ENST00000563207 OSBPL9Q96SU4 736 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 NAPGQ99747 312 aaPredicted RBP15.73■□□□□ 0.11
USB1-208ENST00000563207 NT5MQ9NPB1 228 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 DKK3Q9UBP4 350 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 TRHDEQ9UKU6 1024 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 ATP8A1Q9Y2Q0 1164 aa15.73■□□□□ 0.11
USB1-208ENST00000563207 A0A087WV48 116 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 CTAGE9A4FU28 777 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 CFAP69A5D8W1 941 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 KCNK1O00180 336 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 SCAMP1O15126 338 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 STK10O94804 968 aaKnown RBP15.72■□□□□ 0.11
USB1-208ENST00000563207 FGGP02679 453 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 TUBB4AP04350 444 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 CELA2BP08218 269 aaPredicted RBP15.72■□□□□ 0.11
USB1-208ENST00000563207 NME1P15531 152 aaKnown RBP15.72■□□□□ 0.11
USB1-208ENST00000563207 JUNDP17535 347 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 SERPINA4P29622 427 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 CXCR5P32302 372 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 EIF2S3P41091 472 aaKnown RBP15.72■□□□□ 0.11
USB1-208ENST00000563207 SCNN1BP51168 640 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 SUOXP51687 545 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 ETF1P62495 437 aaKnown RBP15.72■□□□□ 0.11
USB1-208ENST00000563207 ILKQ13418 452 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 RTP5Q14D33 572 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 PAPD7Q5XG87 772 aaKnown RBP15.72■□□□□ 0.11
USB1-208ENST00000563207 KCTD16Q68DU8 428 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 CRTC1Q6UUV9 634 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 PGBD5Q8N414 524 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 DCBLD1Q8N8Z6 715 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 LMX1AQ8TE12 382 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 NXPE2Q96DL1 559 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 SUV39H2Q9H5I1 410 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 SCUBE2Q9NQ36 999 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 NLGN3Q9NZ94 848 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 RAI2Q9Y5P3 530 aa15.72■□□□□ 0.11
USB1-208ENST00000563207 TTC24A2A3L6 582 aaPredicted RBP15.71■□□□□ 0.11
USB1-208ENST00000563207 MUSKO15146 869 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 OPA1O60313 960 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 BRINP1O60477 761 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 SOCS5O75159 536 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 STIP1P31948 543 aaKnown RBP15.71■□□□□ 0.11
USB1-208ENST00000563207 RABIFP47224 123 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 POLR2LP62875 67 aaKnown RBP15.71■□□□□ 0.11
USB1-208ENST00000563207 BCL2L1Q07817 233 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 ITKQ08881 620 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 CCNG2Q16589 344 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms