RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 UXTQ9UBK9 157 aaPredicted RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 APOBEC2Q9Y235 224 aaKnown RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 TRIM17Q9Y577 477 aa11.6□□□□□ -0.55
USP35-207ENST00000530546 NYNRINQ9P2P1 1898 aaKnown RBP11.6□□□□□ -0.55
USP35-207ENST00000530546 COL4A4P53420 1690 aaPredicted RBP11.59□□□□□ -0.55
USP35-207ENST00000530546 PATJQ8NI35 1801 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 SCAMP3O14828 347 aaKnown RBP11.59□□□□□ -0.55
USP35-207ENST00000530546 COL6A1P12109 1028 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 PAMP19021 973 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 NCF2P19878 526 aaPredicted RBP11.59□□□□□ -0.55
USP35-207ENST00000530546 OR1D2P34982 312 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 SERPINH1P50454 418 aaKnown RBP11.59□□□□□ -0.55
USP35-207ENST00000530546 C16orf72Q14CZ0 275 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 ZNF789Q5FWF6 425 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 NEPROQ6NW34 567 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 CNSTQ6PJW8 725 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 PTAR1Q7Z6K3 402 aaPredicted RBP11.59□□□□□ -0.55
USP35-207ENST00000530546 PGBD5Q8N414 524 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 POU5F2Q8N7G0 328 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 FBXO22Q8NEZ5 403 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 ADCY4Q8NFM4 1077 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 OR6P1Q8NGX9 317 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 CNBD2Q96M20 576 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 OMDQ99983 421 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 SPON2Q9BUD6 331 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 GATA5Q9BWX5 397 aaPredicted RBP11.59□□□□□ -0.55
USP35-207ENST00000530546 NSMCE4AQ9NXX6 385 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 APPL1Q9UKG1 709 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 FBXO5Q9UKT4 447 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 H7C4K7 107 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 TRIM13O60858 407 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 GJB5O95377 273 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 CHRNGP07510 517 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 PIRTP0C851 137 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 SLC35E2BP0CK96 405 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 TACR2P21452 398 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 IDH3AP50213 366 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 EPHB1P54762 984 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 SLC12A2P55011 1212 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 TAS2R39P59534 338 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 UGP2Q16851 508 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 FAM117BQ6P1L5 589 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 LRRC49Q8IUZ0 686 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 FBXW8Q8N3Y1 598 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 NXNL1Q96CM4 212 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 PHF12Q96QT6 1004 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 SEMA3CQ99985 751 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 MCMBPQ9BTE3 642 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 COQ6Q9Y2Z9 468 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 ACOT9Q9Y305 439 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 KCTD3Q9Y597 815 aa11.59□□□□□ -0.55
USP35-207ENST00000530546 A0A0D9SEW6 157 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 FAM92AA1XBS5 289 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 FUOMA2VDF0 154 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 OR51F1A6NGY5 319 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 IRF1P10914 325 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 STMN1P16949 149 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 ALDH3B2P48448 385 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 PTPRCAPQ14761 206 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 TGFBIQ15582 683 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 CLPPQ16740 277 aaPredicted RBP11.58□□□□□ -0.55
USP35-207ENST00000530546 RBM20Q5T481 1227 aaKnown RBP11.58□□□□□ -0.55
USP35-207ENST00000530546 KIAA1841Q6NSI8 718 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.58□□□□□ -0.55
USP35-207ENST00000530546 ANKS3Q6ZW76 656 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 LPCAT2Q7L5N7 544 aa11.58□□□□□ -0.55
USP35-207ENST00000530546 SREK1Q8WXA9 508 aaKnown RBP11.58□□□□□ -0.55
USP35-207ENST00000530546 F5H5T6 163 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 FKTNO75072 461 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 MMP2P08253 660 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 THRAP10827 490 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 COL6A2P12110 1019 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 MPSTP25325 297 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 NAGLUP54802 743 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 RAB10P61026 200 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 SLC12A1Q13621 1099 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 RALGPS1Q5JS13 557 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 SPOUT1Q5T280 376 aaKnown RBP11.58□□□□□ -0.56
USP35-207ENST00000530546 TMCO2Q7Z6W1 182 aaPredicted RBP11.58□□□□□ -0.56
USP35-207ENST00000530546 FSTL5Q8N475 847 aaPredicted RBP11.58□□□□□ -0.56
USP35-207ENST00000530546 OR7D4Q8NG98 312 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 BORCS5Q969J3 196 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 C1QTNF1Q9BXJ1 281 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 NUF2Q9BZD4 464 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 TREX1Q9NSU2 369 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 SELENONQ9NZV5 590 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 XPR1Q9UBH6 696 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 PCDHB12Q9Y5F1 795 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 IGLV3-10A0A075B6K4 115 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 GOLGA8QA0A0J9YX86 632 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 HEATR9A2RTY3 570 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 GOLGA8OA6NCC3 632 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 GOLGA8NF8WBI6 632 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 ZNF701M0R085 212 aaPredicted RBP11.58□□□□□ -0.56
USP35-207ENST00000530546 NEMP1O14524 444 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 MUSKO15146 869 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 PRDX6P30041 224 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 SLC6A4P31645 630 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 GRIA4P48058 902 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 ALDH7A1P49419 539 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms