RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 PRPF39Q86UA1 669 aaKnown RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 TAGAPQ8N103 731 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 C12orf76Q8N812 135 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 TOR1AIP2Q8NFQ8 470 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 MYCBPAPQ8TBZ2 947 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 Q8TCH9 128 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 SSH3Q8TE77 659 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 ATP8B4Q8TF62 1192 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 SCFD2Q8WU76 684 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 FAM149B1Q96BN6 582 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 TRMT61AQ96FX7 289 aaKnown RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 CDCA3Q99618 268 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 MTG1Q9BT17 334 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 CLPBQ9H078 707 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 PLSCR4Q9NRQ2 329 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 ANKMY1Q9P2S6 941 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 TESQ9UGI8 421 aaKnown RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 SLC25A13Q9UJS0 675 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 PSAT1Q9Y617 370 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 PLXNA4Q9HCM2 1894 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 FAM90A7PA6NKC0 464 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 TMEM200CA6NKL6 621 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 SHISA7A6NL88 538 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 FAM90A22PA8MWA6 464 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 FAM90A12PA8MX19 464 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 FAM90A23PA8MXZ1 464 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 YY2O15391 372 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 MPPED1O15442 326 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 PEX11BO96011 259 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 RPN1P04843 607 aaKnown RBP4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 CHRM4P08173 479 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 SPARCP09486 303 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 NPSP0C0P6 89 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 CSH1P0DML2 217 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 CSH2P0DML3 217 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 RRM1P23921 792 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 NFKBIAP25963 317 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 CXCR5P32302 372 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 MCM5P33992 734 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 ABCG1P45844 678 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 HARS2P49590 506 aaKnown RBP4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 MVDP53602 400 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 MC1RQ01726 317 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 CREB5Q02930 508 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 TOB2Q14106 344 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 GPNMBQ14956 572 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 DUSP6Q16828 381 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 PLEKHS1Q5SXH7 462 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 RARS2Q5T160 578 aaKnown RBP4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 SLC30A6Q6NXT4 461 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 C16orf89Q6UX73 402 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 FAM9BQ8IZU0 186 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 FAM133AQ8N9E0 248 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 C11orf65Q8NCR3 313 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 DBF4BQ8NFT6 615 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 CNOT9Q92600 299 aaKnown RBP4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 SMARCE1Q969G3 411 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 TOP1MTQ969P6 601 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 JAKMIP2Q96AA8 810 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 FAM120BQ96EK7 910 aaKnown RBP4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 CALML4Q96GE6 196 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 FBXL20Q96IG2 436 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 PRR25Q96S07 402 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 BAG1Q99933 345 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 MAK16Q9BXY0 300 aaKnown RBP4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 TRIM31Q9BZY9 425 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 TRIM2Q9C040 744 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 SLC25A18Q9H1K4 315 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 ARRDC1-AS1Q9H2J1 176 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 SMARCAD1Q9H4L7 1026 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 IL21RQ9HBE5 538 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 SEPT11Q9NVA2 429 aaKnown RBP4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 LIMA1Q9UHB6 759 aaKnown RBP4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 DUSP10Q9Y6W6 482 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 KIAA1671Q9BY89 1806 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 SCN10AQ9Y5Y9 1956 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 FLNCQ14315 2725 aa4.94□□□□□ -1.62
HMGB1P23-201ENST00000518743 F8P00451 2351 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 NBPF19A0A087WUL8 3843 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 USP9YO00507 2555 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 CENPEQ02224 2701 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 ITPR2Q14571 2701 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 C4orf47A7E2U8 309 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 PTGES3LE9PB15 166 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 F5H6K3 240 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 GCOM1H8Y6P7 765 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 M0QZQ0 153 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 VILLO15195 856 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 TNFSF14O43557 240 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 AHCYL1O43865 530 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 VNN1O95497 513 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 HLA-DQA2P01906 255 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 IGKV5-2P06315 115 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 CEACAM1P13688 526 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 PORP16435 677 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 HOXB9P17482 250 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 GSTM2P28161 218 aa4.93□□□□□ -1.62
HMGB1P23-201ENST00000518743 CA8P35219 290 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms