RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 PTCD2Q8WV60 388 aaKnown RBP13.78□□□□□ -0.2
NPHP4-207ENST00000470763 TRAPPC12Q8WVT3 735 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 DHRS1Q96LJ7 313 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 PTPRHQ9HD43 1115 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 NRBP2Q9NSY0 501 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 ABCB7O75027 752 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 STAG3L1P0CL83 205 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 NR4A2P43354 598 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 TRIM32Q13049 653 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 FUT11Q495W5 492 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 RABL3Q5HYI8 236 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 IRAK1BP1Q5VVH5 260 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 LCN8Q6JVE9 175 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 CYHR1Q6ZMK1 362 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 SLC16A12Q6ZSM3 486 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 VASH1Q7L8A9 365 aaPredicted RBP13.78□□□□□ -0.2
NPHP4-207ENST00000470763 CLIP4Q8N3C7 705 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 DNAJB14Q8TBM8 379 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 SLC35F5Q8WV83 523 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 LPAR1Q92633 364 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 FAM149B1Q96BN6 582 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 ZNF408Q9H9D4 720 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 AKIP1Q9NQ31 210 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 ACTR3BQ9P1U1 418 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 KLHL3Q9UH77 587 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 ZNF229Q9UJW7 825 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 USP22Q9UPT9 525 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 FXYD1O00168 92 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 S100BP04271 92 aaPredicted RBP13.77□□□□□ -0.2
NPHP4-207ENST00000470763 CES1P23141 567 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 ATP5F1P24539 256 aaPredicted RBP13.77□□□□□ -0.2
NPHP4-207ENST00000470763 ADORA2BP29275 332 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 STAT5BP51692 787 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 TAS2R39P59534 338 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 INAQ16352 499 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 AMHR2Q16671 573 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 PAGE2BQ5JRK9 111 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 GADL1Q6ZQY3 521 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 SLC22A16Q86VW1 577 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 FKBP10Q96AY3 582 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 EFHD2Q96C19 240 aaPredicted RBP13.77□□□□□ -0.2
NPHP4-207ENST00000470763 ROPN1LQ96C74 230 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 MRPL45Q9BRJ2 306 aaKnown RBP13.77□□□□□ -0.2
NPHP4-207ENST00000470763 C11orf84Q9BUA3 381 aaPredicted RBP13.77□□□□□ -0.2
NPHP4-207ENST00000470763 RHOBTB2Q9BYZ6 727 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 NACA2Q9H009 215 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.77□□□□□ -0.2
NPHP4-207ENST00000470763 ANKMY1Q9P2S6 941 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 TMA7Q9Y2S6 64 aaKnown RBP13.77□□□□□ -0.2
NPHP4-207ENST00000470763 VWA7Q9Y334 891 aa13.77□□□□□ -0.2
NPHP4-207ENST00000470763 H0Y858 1186 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 ANGPT2O15123 496 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 NFKB1P19838 968 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 SLC6A2P23975 617 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 CD68P34810 354 aaPredicted RBP13.77□□□□□ -0.21
NPHP4-207ENST00000470763 ADAM17P78536 824 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 HACD2Q6Y1H2 254 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 EXOC8Q8IYI6 725 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 SPARTQ8N0X7 666 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 AFAP1L2Q8N4X5 818 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 CENPIQ92674 756 aaPredicted RBP13.77□□□□□ -0.21
NPHP4-207ENST00000470763 ZMAT2Q96NC0 199 aaKnown RBP13.77□□□□□ -0.21
NPHP4-207ENST00000470763 TLR9Q9NR96 1032 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 FZD10Q9ULW2 581 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 SCN1AP35498 2009 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 TTC24A2A3L6 582 aaPredicted RBP13.77□□□□□ -0.21
NPHP4-207ENST00000470763 A8MT66 165 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 LDLRP01130 860 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 IQCF3P0C7M6 154 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 JUNBP17275 347 aaPredicted RBP13.77□□□□□ -0.21
NPHP4-207ENST00000470763 GPX3P22352 226 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 SULT1E1P49888 294 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 FPGSQ05932 587 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 INCA1Q0VD86 236 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 UGT3A2Q3SY77 523 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 PKDCCQ504Y2 493 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 PRR23BQ6ZRT6 265 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 SLC30A3Q99726 388 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 MRPL57Q9BQC6 102 aaKnown RBP13.77□□□□□ -0.21
NPHP4-207ENST00000470763 WDR12Q9GZL7 423 aaKnown RBP13.77□□□□□ -0.21
NPHP4-207ENST00000470763 NOL6Q9H6R4 1146 aaKnown RBP13.77□□□□□ -0.21
NPHP4-207ENST00000470763 CDHR5Q9HBB8 845 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 SCUBE2Q9NQ36 999 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 SETD4Q9NVD3 440 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 ABCD2Q9UBJ2 740 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 DSEQ9UL01 958 aa13.77□□□□□ -0.21
NPHP4-207ENST00000470763 UBFD1O14562 309 aaKnown RBP13.76□□□□□ -0.21
NPHP4-207ENST00000470763 ALOX5P09917 674 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 CA8P35219 290 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 HADHAP40939 763 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 LEPRP48357 1165 aaKnown RBP13.76□□□□□ -0.21
NPHP4-207ENST00000470763 SLC13A2Q13183 592 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 POU6F1Q14863 301 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 CLPPQ16740 277 aaPredicted RBP13.76□□□□□ -0.21
NPHP4-207ENST00000470763 PLEKHG7Q6ZR37 379 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 ZCCHC7Q8N3Z6 543 aaKnown RBP13.76□□□□□ -0.21
NPHP4-207ENST00000470763 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 HTRA1Q92743 480 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 RNF145Q96MT1 663 aa13.76□□□□□ -0.21
NPHP4-207ENST00000470763 YTHDF1Q9BYJ9 559 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms