RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CYTH2Q99418 400 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 CTRCQ99895 268 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 FUT8Q9BYC5 575 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TWSG1Q9GZX9 223 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMEM245Q9H330 911 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 DHX33Q9H6R0 707 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF287Q9HBT7 754 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 MRPS30Q9NP92 439 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 NMRK2Q9NPI5 230 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 SAMSN1Q9NSI8 373 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 NRBP2Q9NSY0 501 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 RAB20Q9NX57 234 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ACTR10Q9NZ32 417 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ASH2LQ9UBL3 628 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 DNAJB4Q9UDY4 337 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ENOPH1Q9UHY7 261 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 SNX7Q9UNH6 387 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ERVK-11Q9UQG0 969 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 GINS2Q9Y248 185 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC22A14Q9Y267 594 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF175Q9Y473 711 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 KLF2Q9Y5W3 355 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 IQGAP3Q86VI3 1631 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 SAMD9LQ8IVG5 1584 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PLEKHG1Q9ULL1 1385 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 MYO5CQ9NQX4 1742 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 ASXL1Q8IXJ9 1541 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 SCAF11Q99590 1463 aaKnown RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 hCG_1807616A0A1W2PRN6 198 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TMEM120BA0PK00 339 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 SMCO2A6NFE2 343 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 OR6C75A6NL08 312 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 IQCF5A8MTL0 148 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 A8MX80 341 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 A8MXE2 369 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 H3BUI4 141 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 LAD1O00515 517 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 GPR171O14626 319 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 MEIS2O14770 477 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 ANGPT2O15123 496 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 PPM1DO15297 605 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 BCAS2O75934 225 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CSF2P04141 144 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TUBB4AP04350 444 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 GNSP15586 552 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CKMT2P17540 419 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 ITGB6P18564 788 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TYMPP19971 482 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CHRM3P20309 590 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 RAB4AP20338 218 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 ABCB4P21439 1286 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TGM1P22735 817 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 GSTM2P28161 218 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CSF2RBP32927 897 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 STAT6P42226 847 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 RABIFP47224 123 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CLCN5P51795 746 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 LUMP51884 338 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 RAD23AP54725 363 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 NPEPPSP55786 919 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 RAB4BP61018 213 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 HNRNPKP61978 463 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 PRAMEP78395 509 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 MXRA7P84157 204 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 RHAGQ02094 409 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 KIF23Q02241 960 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 RPA4Q13156 261 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 PMS2P3Q13401 168 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TOB2Q14106 344 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CAPRIN1Q14444 709 aaKnown RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 FASTKD3Q14CZ7 662 aaKnown RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 RPS6KA2Q15349 733 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 SEC23BQ15437 767 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 EZH2Q15910 746 aaKnown RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 MAPK6Q16659 721 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 INAVAQ3KP66 663 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 KCTD21Q4G0X4 260 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 DNAL1Q4LDG9 190 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 FNDC3BQ53EP0 1204 aaKnown RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF805Q5CZA5 627 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 FIGNQ5HY92 759 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZCCHC12Q6PEW1 402 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 RNF207Q6ZRF8 634 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TRMT10CQ7L0Y3 403 aaKnown RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TAS2R42Q7RTR8 314 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TMPRSS9Q7Z410 1059 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 MTDHQ86UE4 582 aaKnown RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TBC1D10CQ8IV04 446 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 DNAJC10Q8IXB1 793 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 PPIL6Q8IXY8 311 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CMTR2Q8IYT2 770 aaKnown RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 IQCKQ8N0W5 287 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CLEC4FQ8N1N0 589 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 PPM1KQ8N3J5 372 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 ANKRD13CQ8N6S4 541 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TSPYL6Q8N831 410 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 IGSF22Q8N9C0 903 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 FSIP1Q8NA03 581 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TMEM145Q8NBT3 493 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 SPATA4Q8NEY3 305 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms