RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 ZYG11AQ6WRX3 759 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 CPSF7Q8N684 471 aaKnown RBP17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 C12orf50Q8NA57 414 aaPredicted RBP17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 ALG3Q92685 438 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 YME1L1Q96TA2 773 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 SMPD3Q9NY59 655 aaPredicted RBP17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 FBXO5Q9UKT4 447 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 ST3GAL5Q9UNP4 418 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 BCKDKO14874 412 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 SIN3BO75182 1162 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 MATKP42679 507 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 TCEA2Q15560 299 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 CCDC157Q569K6 752 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 REP15Q6BDI9 236 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 RNF19BQ6ZMZ0 732 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 TRAPPC5Q8IUR0 188 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 TRPV1Q8NER1 839 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 LINGO1Q96FE5 620 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 SNX7Q9UNH6 387 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 VWA7Q9Y334 891 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 IRAK3Q9Y616 596 aa17.13■□□□□ 0.33
SNAPC3-202ENST00000380821 RPL7AP62424 266 aaKnown RBP17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 HSF2Q03933 536 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 SPPL2CQ8IUH8 684 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 TCAIMQ8N3R3 496 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 A0A1W2PRG6 482 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 DHX15O43143 795 aaKnown RBP17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 CCNE2O96020 404 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 RPS6KA3P51812 740 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 POLR2JP52435 117 aaKnown RBP17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 GMFBP60983 142 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 CTBP1Q13363 440 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 WSCD1Q658N2 575 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 SPATA6LQ8N4H0 392 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 LGMNQ99538 433 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 DIP2CQ9Y2E4 1556 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 AP3D1O14617 1153 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 SLC6A2P23975 617 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 WEE1P30291 646 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 ENPEPQ07075 957 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 SUN5Q8TC36 379 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 PTCD2Q8WV60 388 aaKnown RBP17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 ATP13A3Q9H7F0 1226 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 LGALS2P05162 132 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 CCR4P51679 360 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 ITGA7Q13683 1181 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 PIK3C3Q8NEB9 887 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 TLCD1Q96CP7 247 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 CAB39LQ9H9S4 337 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 PFDN2Q9UHV9 154 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 PGRMC2O15173 223 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 PAPSS1O43252 624 aaPredicted RBP17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 ZNF12P17014 697 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 LPOP22079 712 aaPredicted RBP17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 IGFBP5P24593 272 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 PRKAG1P54619 331 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 SLC1A5Q15758 541 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 ZACNQ401N2 412 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 FNDC3BQ53EP0 1204 aaKnown RBP17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 TNFAIP8L3Q5GJ75 292 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 RNF44Q7L0R7 432 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 TDRPQ86YL5 185 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 PURBQ96QR8 312 aaKnown RBP17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 WDR18Q9BV38 432 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 PCDH18Q9HCL0 1135 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 PTTG2Q9NZH5 202 aa17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 FBXO9Q9UK97 447 aaPredicted RBP17.12■□□□□ 0.33
SNAPC3-202ENST00000380821 DISP2A7MBM2 1401 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 OGNP20774 298 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 MRPS5P82675 430 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 HSPA14Q0VDF9 509 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 CELF3Q5SZQ8 465 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 DEF8Q6ZN54 512 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 DET1Q7L5Y6 550 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 FITM2Q8N6M3 262 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 PNPT1Q8TCS8 783 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 TECPR2O15040 1411 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 FAM92AA1XBS5 289 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 CASKO14936 926 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 ERCC2P18074 760 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 OR52K2Q8NGK3 314 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 MOV10Q9HCE1 1003 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 DDX4Q9NQI0 724 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 TMPRSS4Q9NRS4 437 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 SMPD4Q9NXE4 827 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 RCOR3Q9P2K3 495 aaPredicted RBP17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 COQ6Q9Y2Z9 468 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 ARHGEF33A8MVX0 844 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 ZBTB11O95625 1053 aaPredicted RBP17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 PTP4A2Q12974 167 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 GLYATQ6IB77 296 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 RPTNQ6XPR3 784 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 SVOPLQ8N434 492 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 STARD7Q9NQZ5 370 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 PTCH2Q9Y6C5 1203 aa17.11■□□□□ 0.33
SNAPC3-202ENST00000380821 ATRNO75882 1429 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms