RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 UBL7Q96S82 380 aaPredicted RBP14.24□□□□□ -0.13
NELFE-201ENST00000375425 NT5MQ9NPB1 228 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 KCTD5Q9NXV2 234 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 PCDHGA8Q9Y5G5 932 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.24□□□□□ -0.132e-7■■■■□ 25.7
NELFE-201ENST00000375425 PMS2P1A4D2B8 440 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 NPIPB15A6NHN6 443 aaPredicted RBP14.24□□□□□ -0.13
NELFE-201ENST00000375425 EIF4E1BA6NMX2 242 aaKnown RBP14.24□□□□□ -0.13
NELFE-201ENST00000375425 PGLSO95336 258 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 PDHA1P08559 390 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 CYP2A6P11509 494 aaPredicted RBP14.24□□□□□ -0.13
NELFE-201ENST00000375425 LHCGRP22888 699 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 GJC1P36383 396 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 GARSP41250 739 aaKnown RBP14.24□□□□□ -0.13
NELFE-201ENST00000375425 PDX1P52945 283 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 ITKQ08881 620 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 ARHGEF7Q14155 803 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 DPYSL3Q14195 570 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 Q6ZVL8 140 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 GPR155Q7Z3F1 870 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 SFTPA2Q8IWL1 248 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 WDR36Q8NI36 951 aaKnown RBP14.24□□□□□ -0.13
NELFE-201ENST00000375425 PIH1D2Q8WWB5 315 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 GFM1Q96RP9 751 aaKnown RBP14.24□□□□□ -0.13
NELFE-201ENST00000375425 XPO4Q9C0E2 1151 aaKnown RBP14.24□□□□□ -0.13
NELFE-201ENST00000375425 DPEP2Q9H4A9 486 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 CTTNBP2NLQ9P2B4 639 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 NENFQ9UMX5 172 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 PPIL1Q9Y3C6 166 aa14.24□□□□□ -0.13
NELFE-201ENST00000375425 FASNP49327 2511 aaKnown RBP14.23□□□□□ -0.13
NELFE-201ENST00000375425 A0A1W2PQM1 296 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 PRSS38A1L453 326 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 PSMD11O00231 422 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 MFSD11O43934 449 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 PROSCO94903 275 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 MAP3K6O95382 1288 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 FUCA1P04066 466 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 RPLP0P05388 317 aaKnown RBP14.23□□□□□ -0.13
NELFE-201ENST00000375425 CEACAM5P06731 702 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 H2AFZP0C0S5 128 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 MYCLP1P12525 358 aaPredicted RBP14.23□□□□□ -0.13
NELFE-201ENST00000375425 GLB1P16278 677 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 CTPS1P17812 591 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 HNRNPH3P31942 346 aaKnown RBP14.23□□□□□ -0.13
NELFE-201ENST00000375425 CXADRP78310 365 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 GALNT2Q10471 571 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 PAFAH1B3Q15102 231 aaKnown RBP14.23□□□□□ -0.13
NELFE-201ENST00000375425 ZSCAN23Q3MJ62 389 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 ANKRD20A8PQ5CZ79 823 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 NCBP2-AS2Q69YL0 99 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 USP45Q70EL2 814 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 H2AFVQ71UI9 128 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 B3GNT8Q7Z7M8 397 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 TSPAN33Q86UF1 283 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 HEATR4Q86WZ0 1026 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 ARL14Q8N4G2 192 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.23□□□□□ -0.13
NELFE-201ENST00000375425 Q8N9G6 341 aaPredicted RBP14.23□□□□□ -0.13
NELFE-201ENST00000375425 KCNE4Q8WWG9 221 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 DTD2Q96FN9 168 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 MCCC1Q96RQ3 725 aaPredicted RBP14.23□□□□□ -0.13
NELFE-201ENST00000375425 SEMA3CQ99985 751 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 TEX101Q9BY14 249 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 POLR1EQ9GZS1 481 aaKnown RBP14.23□□□□□ -0.13
NELFE-201ENST00000375425 CARS2Q9HA77 564 aaKnown RBP14.23□□□□□ -0.13
NELFE-201ENST00000375425 PHPT1Q9NRX4 125 aaPredicted RBP14.23□□□□□ -0.13
NELFE-201ENST00000375425 UVRAGQ9P2Y5 699 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 APPL1Q9UKG1 709 aa14.23□□□□□ -0.13
NELFE-201ENST00000375425 PTPRQQ9UMZ3 2332 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 CCDC187A0A096LP49 1063 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 A0A0U1RQS6 177 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 GOLGA6CA6NDK9 693 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 GOLGA6BA6NDN3 693 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 B4DGG1 531 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 MATN3O15232 486 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 KLK10O43240 276 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 FZD6O60353 706 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 NOBOXO60393 691 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 TNFSF15O95150 251 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 TPM3P06753 285 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 GOLGA6DP0CG33 693 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 PDK2Q15119 407 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 SLC18A3Q16572 532 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 TSR1Q2NL82 804 aaKnown RBP14.22□□□□□ -0.13
NELFE-201ENST00000375425 BROXQ5VW32 411 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 RAET1GQ6H3X3 334 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 TIGD7Q6NT04 549 aaPredicted RBP14.22□□□□□ -0.13
NELFE-201ENST00000375425 TECPR1Q7Z6L1 1165 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 MAP7D3Q8IWC1 876 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 NDUFAF2Q8N183 169 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 LRRN4Q8WUT4 740 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 CTNNBL1Q8WYA6 563 aaPredicted RBP14.22□□□□□ -0.13
NELFE-201ENST00000375425 ZNF670Q9BS34 389 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 PACSIN1Q9BY11 444 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 DPH1Q9BZG8 443 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 FOXP3Q9BZS1 431 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 LRRN3Q9H3W5 708 aa14.22□□□□□ -0.13
NELFE-201ENST00000375425 SUDS3Q9H7L9 328 aaPredicted RBP14.22□□□□□ -0.13
NELFE-201ENST00000375425 RBM22Q9NW64 420 aaKnown RBP eCLIP14.22□□□□□ -0.13
NELFE-201ENST00000375425 GOLGA6AQ9NYA3 693 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms