RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 KCTD15Q96SI1 283 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-202ENST00000374426 EIF3CQ99613 913 aaKnown RBP13.81□□□□□ -0.2
CXCL12-202ENST00000374426 ARHGAP9Q9BRR9 750 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 SNRNP25Q9BV90 132 aaKnown RBP13.81□□□□□ -0.2
CXCL12-202ENST00000374426 CARS2Q9HA77 564 aaKnown RBP13.81□□□□□ -0.2
CXCL12-202ENST00000374426 SP110Q9HB58 689 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 CHMP5Q9NZZ3 219 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 B4GALT6Q9UBX8 382 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 PCSK1NQ9UHG2 260 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 RELNP78509 3460 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 TTC24A2A3L6 582 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-202ENST00000374426 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-202ENST00000374426 PDE2AO00408 941 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-202ENST00000374426 TERTO14746 1132 aaKnown RBP13.8□□□□□ -0.2
CXCL12-202ENST00000374426 ARHGAP6O43182 974 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 DAPK3O43293 454 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 CPNE6O95741 557 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 FGF1P05230 155 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 CEACAM5P06731 702 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 DESP17661 470 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 PSMA2P25787 234 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 CD82P27701 267 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 ALDH4A1P30038 563 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 OR1D5P58170 312 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 AP1S1P61966 158 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 UBXN1Q04323 297 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 IL10RBQ08334 325 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 NR1D2Q14995 579 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 CNGA3Q16281 694 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 TBR1Q16650 682 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 TSR1Q2NL82 804 aaKnown RBP13.8□□□□□ -0.2
CXCL12-202ENST00000374426 ERMARDQ5T6L9 678 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 ZNF574Q6ZN55 896 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-202ENST00000374426 TP53INP2Q8IXH6 220 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 NUS1Q96E22 293 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 ERGIC2Q96RQ1 377 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 NUDT22Q9BRQ3 303 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 SYT11Q9BT88 431 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 TEX101Q9BY14 249 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 B3GNT4Q9C0J1 378 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 SUDS3Q9H7L9 328 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-202ENST00000374426 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
CXCL12-202ENST00000374426 IL17BQ9UHF5 180 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 PCDHB11Q9Y5F2 797 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 ST14Q9Y5Y6 855 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 SDK2Q58EX2 2172 aa13.8□□□□□ -0.2
CXCL12-202ENST00000374426 IGHV5-10-1A0A0J9YXX1 117 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 ATMINO43313 823 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 HTRA2O43464 458 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 ECEL1O95672 775 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 AK4P27144 223 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 ARSDP51689 593 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 SLC10A7Q0GE19 358 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 ILF3Q12906 894 aaKnown RBP eCLIP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 LBRQ14739 615 aaKnown RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 PPP6R3Q5H9R7 873 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 TMCO4Q5TGY1 634 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 PLEKHA7Q6IQ23 1121 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 APTXQ7Z2E3 356 aaKnown RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 HEATR4Q86WZ0 1026 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 CBARPQ8N350 705 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 ZSCAN1Q8NBB4 408 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 RCBTB1Q8NDN9 531 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 ZDHHC1Q8WTX9 485 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 PTCD2Q8WV60 388 aaKnown RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 PATE1Q8WXA2 126 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 JPH3Q8WXH2 748 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 PMEPA1Q969W9 287 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 SEMA3CQ99985 751 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 FUCA2Q9BTY2 467 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 GSDMCQ9BYG8 508 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 FRMD8Q9BZ67 464 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 TRIM7Q9C029 511 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 PHPT1Q9NRX4 125 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 PARVAQ9NVD7 372 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 TRNAU1APQ9NX07 287 aaKnown RBP13.79□□□□□ -0.2
CXCL12-202ENST00000374426 TAAR2Q9P1P5 351 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 SEPT3Q9UH03 358 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 PCDHGC4Q9Y5F7 938 aa13.79□□□□□ -0.2
CXCL12-202ENST00000374426 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.78□□□□□ -0.2
CXCL12-202ENST00000374426 TMEM191CA6NGB0 347 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 LRRC10BA6NIK2 292 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 RHPN2P1A8MT19 583 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 TMCO5BA8MYB1 307 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 HGSO14964 777 aaPredicted RBP13.78□□□□□ -0.2
CXCL12-202ENST00000374426 SUV39H1O43463 412 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 SOCS5O75159 536 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 HEXIM1O94992 359 aaKnown RBP13.78□□□□□ -0.2
CXCL12-202ENST00000374426 PEX11BO96011 259 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 FGF3P11487 239 aaPredicted RBP13.78□□□□□ -0.2
CXCL12-202ENST00000374426 FERP16591 822 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 CR2P20023 1033 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 LHCGRP22888 699 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 CD1CP29017 333 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 MIPP30301 263 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 ETV3P41162 512 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 GNPDA1P46926 289 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 RENBPP51606 427 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 CDK3Q00526 305 aa13.78□□□□□ -0.2
CXCL12-202ENST00000374426 DPYSQ14117 519 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms