RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 SNIP1Q8TAD8 396 aaKnown RBP18■□□□□ 0.47
TRAPPC3-202ENST00000373162 LRRN4Q8WUT4 740 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 OLFM3Q96PB7 478 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 TDRD1Q9BXT4 1180 aaKnown RBP18■□□□□ 0.47
TRAPPC3-202ENST00000373162 FRMD8Q9BZ67 464 aaPredicted RBP18■□□□□ 0.47
TRAPPC3-202ENST00000373162 POLR1EQ9GZS1 481 aaKnown RBP18■□□□□ 0.47
TRAPPC3-202ENST00000373162 DEF6Q9H4E7 631 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 ZNHIT6Q9NWK9 470 aaKnown RBP18■□□□□ 0.47
TRAPPC3-202ENST00000373162 KLQ9UEF7 1012 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 A0A0J9YYE9 177 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 NTN3O00634 580 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 DXOO77932 396 aaKnown RBP17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 TRBC1P01850 177 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 ANXA6P08133 673 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 HTR1BP28222 390 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 DPTQ07507 201 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 PPIDQ08752 370 aaKnown RBP17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 ELOCQ15369 112 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 ARMC12Q5T9G4 340 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 OGFOD3Q6PK18 319 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 RFLNAQ6ZTI6 216 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 CNGA4Q8IV77 575 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 KYQ8NBH2 561 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 GPR156Q8NFN8 814 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 NSMCE1Q8WV22 266 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 NUS1Q96E22 293 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 CCDC42Q96M95 316 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 LYSMD1Q96S90 227 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 MRPL40Q9NQ50 206 aaKnown RBP17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 EVA1BQ9NVM1 165 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 KCTD5Q9NXV2 234 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 RABGEF1Q9UJ41 708 aa17.99■□□□□ 0.47
TRAPPC3-202ENST00000373162 A0A0U1RQS6 177 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 AKR1B15C9JRZ8 316 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 ALPIP09923 528 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 CYP2A6P11509 494 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 MYCLP1P12525 358 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 CCNB1P14635 433 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 FECHP22830 423 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 ETV3P41162 512 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 IFI35P80217 286 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 COL9A2Q14055 689 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 ACOX1Q15067 660 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 ISXQ2M1V0 245 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 CRTC1Q6UUV9 634 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 Q6ZVL8 140 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 ARL10Q8N8L6 244 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 ATL2Q8NHH9 583 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 PDCD6IPQ8WUM4 868 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 PTCD2Q8WV60 388 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 NAT6Q93015 286 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 TADA1Q96BN2 335 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 WDR26Q9H7D7 661 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 RBM22Q9NW64 420 aaKnown RBP eCLIP17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 LHX6Q9UPM6 363 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 ST14Q9Y5Y6 855 aa17.98■□□□□ 0.47
TRAPPC3-202ENST00000373162 ARHGEF17Q96PE2 2063 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 CPED1A4D0V7 1026 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 CAPN8A6NHC0 703 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 CACNB4O00305 520 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 NOBOXO60393 691 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 BRINP1O60477 761 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 CSO75390 466 aaKnown RBP17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 CEACAM5P06731 702 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 CTPS1P17812 591 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 MX2P20592 715 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 CES1P23141 567 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 EIF2S3P41091 472 aaKnown RBP17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 STC1P52823 247 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 PTSQ03393 145 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 ZBTB17Q13105 803 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 COL28A1Q2UY09 1125 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 IGF2-ASQ6U949 168 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 USP45Q70EL2 814 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 NLRP8Q86W28 1048 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 C17orf82Q86X59 251 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 SFTPA2Q8IWL1 248 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 CCDC13Q8IYE1 715 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 TPCN2Q8NHX9 752 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 MAPK15Q8TD08 544 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 SCARF2Q96GP6 870 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 PRR11Q96HE9 360 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 DEPDC7Q96QD5 511 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 WDR24Q96S15 920 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 LGMNQ99538 433 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 PADI4Q9UM07 663 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 ENTPD2Q9Y5L3 495 aa17.97■□□□□ 0.47
TRAPPC3-202ENST00000373162 PRSS38A1L453 326 aa17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 LRRD1A4D1F6 860 aa17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 TCEA3O75764 348 aa17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 TNFP01375 233 aa17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 TPM1P09493 284 aa17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 KELP23276 732 aa17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 RPL26P61254 145 aaKnown RBP17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 SKOR1P84550 965 aa17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 CDK3Q00526 305 aa17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 LRRC66Q68CR7 880 aa17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 ZNF765Q7L2R6 523 aa17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 HEATR4Q86WZ0 1026 aa17.96■□□□□ 0.47
TRAPPC3-202ENST00000373162 NRROSQ86YC3 692 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms