RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 MKL2Q9ULH7 1088 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 FZD4Q9ULV1 537 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 ZFR2Q9UPR6 939 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 PLXNA2O75051 1894 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 A0A0U1RQS6 177 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 CCDC66A2RUB6 948 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 C16orf96A6NNT2 1141 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 C1QTNF3-AMACRE9PGA6 284 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 TRAFD1O14545 582 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 KRT86O43790 486 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 RHOBTB1O94844 696 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 FSBPO95073 299 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 IGSF6O95976 241 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 PRNPP04156 253 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 RETP07949 1114 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 MMP2P08253 660 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 ADRB3P13945 408 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 VAMP1P23763 118 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 CCNCP24863 283 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 ITGB7P26010 798 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 OXTRP30559 389 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 RECQLP46063 649 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 RWDD2BP57060 319 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 BNC1Q01954 994 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 DSC2Q02487 901 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 PPIDQ08752 370 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 TRAF2Q12933 501 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 KLF1Q13351 362 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 FGL2Q14314 439 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 RFTN1Q14699 578 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 PPP2R5EQ16537 467 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 IFI16Q16666 785 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 LYSMD4Q5XG99 296 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 SEL1L3Q68CR1 1132 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 SLC36A4Q6YBV0 504 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 BBS12Q6ZW61 710 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 ERN2Q76MJ5 926 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 DSG4Q86SJ6 1040 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 DMRTC2Q8IXT2 367 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 CCNYQ8ND76 341 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 CADM4Q8NFZ8 388 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 OR14C36Q8NHC7 312 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 ARRDC2Q8TBH0 407 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 PIGKQ92643 395 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 KLK6Q92876 244 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 IL12RB2Q99665 862 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 CINPQ9BW66 212 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 TLR10Q9BXR5 811 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 HDAC8Q9BY41 377 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 TSGA10Q9BZW7 698 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 BRD8Q9H0E9 1235 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 ZFYVE1Q9HBF4 777 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 NT5MQ9NPB1 228 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 TRMT1Q9NXH9 659 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 DONSONQ9NYP3 566 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 NCDNQ9UBB6 729 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 EIF2B4Q9UI10 523 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 SCML1Q9UN30 329 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 CA5BQ9Y2D0 317 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 R3HDM2Q9Y2K5 976 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 FADS3Q9Y5Q0 445 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 EP300Q09472 2414 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 ASPMQ8IZT6 3477 aa9.55□□□□□ -0.88
NPLOC4-219ENST00000576713 THADAQ6YHU6 1953 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 TSPAN11A1L157 253 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 AREL1O15033 823 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 FANCGO15287 622 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 NDUFS2O75306 463 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 POP4O95707 220 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 JCHAINP01591 159 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 WNT1P04628 370 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 PDHA1P08559 390 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 CCNB1P14635 433 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 PRLRP16471 622 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 MAT2AP31153 395 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 PTPN7P35236 360 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 MMP13P45452 471 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 CSNK1DP48730 415 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 SCNN1BP51168 640 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 IFI35P80217 286 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 OTUD4Q01804 1114 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 NSUN2Q08J23 767 aaKnown RBP eCLIP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 AP1B1Q10567 949 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 WASHC5Q12768 1159 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 BYSLQ13895 437 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 HNRNPDQ14103 355 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 ZNF235Q14590 738 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 ZNF805Q5CZA5 627 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 MARC1Q5VT66 337 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 FAM46CQ5VWP2 391 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 KIAA0895LQ68EN5 471 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 ZC3H18Q86VM9 953 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 CCDC13Q8IYE1 715 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 KIAA2013Q8IYS2 634 aa9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 C17orf53Q8N3J3 647 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 ZCCHC9Q8N567 271 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-219ENST00000576713 OR2I1PQ8NGU4 316 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms