RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 CNOT1A5YKK6 2376 aaKnown RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 CCDC187A0A096LP49 1063 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 TEX51A0A1B0GUA7 166 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 SSU72P8A0A1W2PR75 194 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 A8MX80 341 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 NUDT21O43809 227 aaKnown RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 AKR1B10O60218 316 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 HEXIM1O94992 359 aaKnown RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 PGLSO95336 258 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 MPOP05164 745 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 MYCLP1P12525 358 aaPredicted RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 CCNB1P14635 433 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 ZFXP17010 805 aaPredicted RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 ZNF30P17039 623 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 CR2P20023 1033 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 TEAD1P28347 426 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 PBX1P40424 430 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 GARSP41250 739 aaKnown RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 ARHGAP25P42331 645 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 RGRP47804 291 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 RPL26P61254 145 aaKnown RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 ILF3Q12906 894 aaKnown RBP eCLIP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 PAFAH1B3Q15102 231 aaKnown RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 SLC18A3Q16572 532 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 CLPPQ16740 277 aaPredicted RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 ALG11Q2TAA5 492 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 ANKRD20A8PQ5CZ79 823 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 CCDC70Q6NSX1 233 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 ARHGAP36Q6ZRI8 547 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 CYP4V2Q6ZWL3 525 aaPredicted RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 SLC35F3Q8IY50 421 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 NRSN1Q8IZ57 195 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 RBFAQ8N0V3 343 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 NPWQ8N729 165 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 CCNYQ8ND76 341 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 ZNF564Q8TBZ8 553 aaPredicted RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 FAM71BQ8TC56 605 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 CCHCR1Q8TD31 782 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 KCNE4Q8WWG9 221 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 FATE1Q969F0 183 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 VOPP1Q96AW1 172 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 NUS1Q96E22 293 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 CCDC42Q96M95 316 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 TSGA13Q96PP4 275 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 GFM1Q96RP9 751 aaKnown RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 UBL7Q96S82 380 aaPredicted RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 SRPK1Q96SB4 655 aaKnown RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 ZNF670Q9BS34 389 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 TEX101Q9BY14 249 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 ADGRE3Q9BY15 652 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 TRIM7Q9C029 511 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 CLPBQ9H078 707 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 BRD8Q9H0E9 1235 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 LRRN3Q9H3W5 708 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 NOD2Q9HC29 1040 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 CYP4F12Q9HCS2 524 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 NT5MQ9NPB1 228 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 RBM22Q9NW64 420 aaKnown RBP eCLIP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 TRNAU1APQ9NX07 287 aaKnown RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 LRIT1Q9P2V4 623 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 APPL1Q9UKG1 709 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 RPL26L1Q9UNX3 145 aaKnown RBP6.53□□□□□ -1.36
FOXN3-205ENST00000553904 PPIL1Q9Y3C6 166 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 NUMA1Q14980 2115 aa6.53□□□□□ -1.36
FOXN3-205ENST00000553904 WDR87Q6ZQQ6 2873 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 SPTBN2O15020 2390 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 LY6G6EA0A0G2JKS1 128 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 PRSS38A1L453 326 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 RGSL1A5PLK6 1076 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 GOLGA6CA6NDK9 693 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 GOLGA6BA6NDN3 693 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 ZNF487B1APH4 448 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 PROSCO94903 275 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 GYPCP04921 128 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 JMJD7P0C870 316 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 GOLGA6DP0CG33 693 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 MYF5P13349 255 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 MAN1A1P33908 653 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 SLC1A1P43005 524 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 TNNT3P45378 269 aaPredicted RBP6.52□□□□□ -1.37
FOXN3-205ENST00000553904 GPR1P46091 355 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 INHBCP55103 352 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 CLDN6P56747 220 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 TMPRSS3P57727 454 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 MAXP61244 160 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 SLC25A11Q02978 314 aaKnown RBP6.52□□□□□ -1.37
FOXN3-205ENST00000553904 DPTQ07507 201 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 CCDC173Q0VFZ6 552 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 RALGDSQ12967 914 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 ZSCAN23Q3MJ62 389 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 C3orf38Q5JPI3 329 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 TPRG1LQ5T0D9 272 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 TMEM164Q5U3C3 297 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 E4F1Q66K89 784 aaPredicted RBP6.52□□□□□ -1.37
FOXN3-205ENST00000553904 DENND2CQ68D51 928 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 PIM3Q86V86 326 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 ZSWIM9Q86XI8 627 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 VSIG1Q86XK7 387 aa6.52□□□□□ -1.37
FOXN3-205ENST00000553904 RHOT2Q8IXI1 618 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms