RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 TNFP01375 233 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 FTLP02792 175 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 ITGA2BP08514 1039 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 ALPIP09923 528 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 SKILP12757 684 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 FERP16591 822 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 WT1P19544 449 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 AMPD1P23109 780 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 HTR1BP28222 390 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 TRIM23P36406 574 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 CSNK1DP48730 415 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 SUOXP51687 545 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 UCNP55089 124 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 INHBCP55103 352 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 MAZP56270 477 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 DPYSQ14117 519 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 CFAP58Q5T655 872 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 TXNRD3NBQ6F5E7 133 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 ERAP2Q6P179 960 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 SASS6Q6UVJ0 657 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 TAF8Q7Z7C8 310 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 GKN2Q86XP6 184 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 NRROSQ86YC3 692 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 JAMLQ86YT9 394 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 CCNJLQ8IV13 435 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 ARL14Q8N4G2 192 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 EXD3Q8N9H8 876 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 OR56A4Q8NGH8 313 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 PATE1Q8WXA2 126 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 SCG3Q8WXD2 468 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 TUBGCP5Q96RT8 1024 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 CINPQ9BW66 212 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 ATP13A3Q9H7F0 1226 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 CYP4F12Q9HCS2 524 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 SPATS2LQ9NUQ6 558 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 ANO10Q9NW15 660 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 B4GALT6Q9UBX8 382 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 TLN1Q9Y490 2541 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 B4DGG1 531 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 DAPK3O43293 454 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 LRCH4O75427 683 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 ELFN1P0C7U0 828 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 AK4P27144 223 aaPredicted RBP11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 SERPINA4P29622 427 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 KIAA1024LP59773 190 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 ZFP36L1Q07352 338 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 BCL2L1Q07817 233 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 IL10RBQ08334 325 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 HLTFQ14527 1009 aaKnown RBP eCLIP11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 IHHQ14623 411 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 GRM3Q14832 879 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 ACOX1Q15067 660 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 CNGA3Q16281 694 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 STX1AQ16623 288 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 SMTNL2Q2TAL5 461 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 LINC00303Q3SY05 128 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 FAM182AQ5T1J6 154 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 CERCAMQ5T4B2 595 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 DENND2CQ68D51 928 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 PNCKQ6P2M8 343 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 CCDC81Q6ZN84 652 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 DPPA4Q7L190 304 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 HSD11B1LQ7Z5J1 315 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 SPRED1Q7Z699 444 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 TSPAN33Q86UF1 283 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 CBARPQ8N350 705 aaPredicted RBP11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 WDR48Q8TAF3 677 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 WBP1Q96G27 269 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 COQ10AQ96MF6 247 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 NAP1L5Q96NT1 182 aaPredicted RBP11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 SEMA6CQ9H3T2 930 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 SP110Q9HB58 689 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 RDH14Q9HBH5 336 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 NOD2Q9HC29 1040 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 PARVAQ9NVD7 372 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 FOXJ2Q9P0K8 574 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 MYO1AQ9UBC5 1043 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 PISDQ9UG56 409 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 MOSPD1Q9UJG1 213 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 PLEKHM1Q9Y4G2 1056 aa11.58□□□□□ -0.56
PRPF40B-212ENST00000551111 PRSS38A1L453 326 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 CR2P20023 1033 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 LHCGRP22888 699 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 CCKBRP32239 447 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 HTR7P34969 479 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 POLD2P49005 469 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 OR1D5P58170 312 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 MAXP61244 160 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 B4GALNT1Q00973 533 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 NSUN2Q08J23 767 aaKnown RBP eCLIP11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 TRAF2Q12933 501 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 C16orf72Q14CZ0 275 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 C14orf28Q4W4Y0 310 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 SPECC1LQ69YQ0 1117 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 ZNF574Q6ZN55 896 aaPredicted RBP11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 VASH2Q86V25 355 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 ZFAND4Q86XD8 727 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 CPNE8Q86YQ8 564 aa11.57□□□□□ -0.56
PRPF40B-212ENST00000551111 SLITRK4Q8IW52 837 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms