RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 GOLGA6L9A6NEM1 432 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CLIC2O15247 247 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 SYNGR3O43761 229 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 PLA2G6O60733 806 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 ATP2C2O75185 946 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 IGHV4-39P01824 125 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CTAGE8P0CG41 777 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CEACAM1P13688 526 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 MYOD1P15172 320 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 ZNF8P17098 575 aaPredicted RBP0.77□□□□□ -2.29
COPB1-212ENST00000534771 CD58P19256 250 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 RRM1P23921 792 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 MAP2K2P36507 400 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 PTPN9P43378 593 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CLCNKAP51800 687 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 BMXP51813 675 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 MVDP53602 400 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 MLLT10P55197 1068 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 ANAPC15P60006 121 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 SEC61BP60468 96 aaKnown RBP0.77□□□□□ -2.29
COPB1-212ENST00000534771 TRA2BP62995 288 aaKnown RBP0.77□□□□□ -2.29
COPB1-212ENST00000534771 IFIT5Q13325 482 aaKnown RBP0.77□□□□□ -2.29
COPB1-212ENST00000534771 PMS2P11Q13670 270 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 ENPP2Q13822 863 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 BYSLQ13895 437 aaKnown RBP0.77□□□□□ -2.29
COPB1-212ENST00000534771 KCNC3Q14003 757 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 IL13RA2Q14627 380 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 PPP2R5AQ15172 486 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CTF1Q16619 201 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 NFE2Q16621 373 aaPredicted RBP0.77□□□□□ -2.29
COPB1-212ENST00000534771 ME3Q16798 604 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 KRT24Q2M2I5 525 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 SLC35G1Q2M3R5 365 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 AP5B1Q2VPB7 878 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 TUBB8Q3ZCM7 444 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 LRRC24Q50LG9 513 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 RUNDC3AQ59EK9 446 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CES5AQ6NT32 575 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 RGMBQ6NW40 437 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 NFRKBQ6P4R8 1299 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 PP632Q6XCG6 107 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 RBMS3Q6XE24 437 aaKnown RBP0.77□□□□□ -2.29
COPB1-212ENST00000534771 Q6ZR54 194 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 ADGRA1Q86SQ6 560 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 DPP9Q86TI2 863 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 GATAD2AQ86YP4 633 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 ZNF584Q8IVC4 421 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CTAGE4Q8IX94 777 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 SLC34A3Q8N130 599 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 MYO1HQ8N1T3 1032 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 GHDCQ8N2G8 530 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 ZNF614Q8N883 585 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 SETD9Q8NE22 299 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 PPHLN1Q8NEY8 458 aaKnown RBP0.77□□□□□ -2.29
COPB1-212ENST00000534771 CEP70Q8NHQ1 597 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 MRGPRDQ8TDS7 321 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CSGALNACT1Q8TDX6 532 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 DUSP19Q8WTR2 217 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 TMEM170AQ8WVE7 144 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 STAG1Q8WVM7 1258 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 ZNRF4Q8WWF5 429 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 FCAMRQ8WWV6 532 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 PPM1EQ8WY54 764 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 THAP4Q8WY91 577 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 SNAPC3Q92966 411 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 ERGIC1Q969X5 290 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 C18orf8Q96DM3 657 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CYYR1Q96J86 154 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 C18orf12Q96KH6 178 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 SYT17Q9BSW7 474 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 TRAF4Q9BUZ4 470 aaPredicted RBP0.77□□□□□ -2.29
COPB1-212ENST00000534771 BICC1Q9H694 974 aaKnown RBP0.77□□□□□ -2.29
COPB1-212ENST00000534771 CHST11Q9NPF2 352 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CNGB3Q9NQW8 809 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 ENTPD7Q9NQZ7 604 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 OBP2AQ9NY56 170 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 DLGAP2Q9P1A6 1054 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 IFT80Q9P2H3 777 aaPredicted RBP0.77□□□□□ -2.29
COPB1-212ENST00000534771 ASIC3Q9UHC3 531 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 RCOR1Q9UKL0 485 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 RCE1Q9Y256 329 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CNPY2Q9Y2B0 182 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 AMDHD2Q9Y303 409 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 HMX3A6NHT5 357 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 A6NL46 340 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 C17orf100A8MU93 164 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 PRR32B1ATL7 298 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 KLRF2D3W0D1 207 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 TMEM178BH3BS89 294 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 EBAG9O00559 213 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 SEPT4O43236 478 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 NCK2O43639 380 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 ASNA1O43681 348 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 HBP1O60381 514 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 METTL18O95568 372 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 SCGB1D2O95969 90 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 IGKV3-15P01624 115 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 PLA2G4BP0C869 781 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 DUX4L4P0CJ87 422 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 ACP5P13686 325 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms