RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CDCP1Q9H5V8 836 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 SFXN1Q9H9B4 322 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 THAP1Q9NVV9 213 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 PARPBPQ9NWS1 579 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 DLGAP2Q9P1A6 1054 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 WNT16Q9UBV4 365 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 CAMK2AQ9UQM7 478 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 TCAF1Q9Y4C2 921 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 SNX8Q9Y5X2 465 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 COPG1Q9Y678 874 aaKnown RBP4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 CACNA1EQ15878 2313 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 KIAA1217Q5T5P2 1943 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 KDM3AQ9Y4C1 1321 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 SPAG17Q6Q759 2223 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 PABPN1LA6NDY0 278 aaKnown RBP4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 GRM8O00222 908 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 CES2O00748 559 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 SLC28A2O43868 658 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 HBP1O60381 514 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 FLOT1O75955 427 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 NCR1O76036 304 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 ZFPL1O95159 310 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 GH2P01242 217 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 CXCL10P02778 98 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 FESP07332 822 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 IL6RP08887 468 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 ACP5P13686 325 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 GLULP15104 373 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 IGFBP2P18065 325 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 DNAJB1P25685 340 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 ACRV1P26436 265 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 SLC8A1P32418 973 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 MTHFRP42898 656 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 JAK3P52333 1124 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 FOXL2P58012 376 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 PRAMEP78395 509 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 JAG1P78504 1218 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 GUCY1B3Q02153 619 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 CDK18Q07002 472 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 AIMP2Q13155 320 aaKnown RBP4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 BTG3Q14201 252 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 GCKRQ14397 625 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 CRYMQ14894 314 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 NAA25Q14CX7 972 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 NONOQ15233 471 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 CC2D1BQ5T0F9 858 aaKnown RBP4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 GRHL2Q6ISB3 625 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 TMEM154Q6P9G4 183 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 VWA1Q6PCB0 445 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 ARMCX2Q7L311 632 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 ENOSF1Q7L5Y1 443 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 ULK2Q8IYT8 1036 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 GALNT4Q8N4A0 578 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 ABHD11Q8NFV4 315 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 CTHRC1Q96CG8 243 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 WDYHV1Q96HA8 205 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 NR1H4Q96RI1 486 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 AP1M1Q9BXS5 423 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 TTC12Q9H892 705 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 ARHGEF3Q9NR81 526 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 EHD2Q9NZN4 543 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 TBC1D29Q9UFV1 150 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 SARDHQ9UL12 918 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 NAALADL1Q9UQQ1 740 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 MAP3K2Q9Y2U5 619 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 CACNA1DQ01668 2161 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 DOCK8Q8NF50 2099 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 ZFHX3Q15911 3703 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 MROH7-TTC4A0A0A0MT08 1334 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 ASTN1O14525 1302 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 ADGRA3Q8IWK6 1321 aa4.96□□□□□ -1.62
HMGB1P23-201ENST00000518743 MYH7BA7E2Y1 1941 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 CCDC151A5D8V7 595 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 TMEM247A6NEH6 219 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 M0QYT0 321 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 SPRY2O43597 315 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 PEX1O43933 1283 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 DKC1O60832 514 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 NDUFA10O95299 355 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 C1RP00736 705 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 CYP4B1P13584 511 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 ZFXP17010 805 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 HOXB8P17481 243 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 RDXP35241 583 aaKnown RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 GGT5P36269 586 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 CSRP3P50461 194 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 FAM3BP58499 235 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 RPS3AP61247 264 aaKnown RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 EIF2B5Q13144 721 aaKnown RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 PRKD1Q15139 912 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 DAB2IPQ5VWQ8 1189 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 ANKRD16Q6P6B7 361 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 SYCE2Q6PIF2 218 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 DCLRE1AQ6PJP8 1040 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 SARM1Q6SZW1 724 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 Q6ZSN1 163 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 USP51Q70EK9 711 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 ZNF551Q7Z340 670 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 MAVSQ7Z434 540 aa4.95□□□□□ -1.62
HMGB1P23-201ENST00000518743 GALNT7Q86SF2 657 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms