RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 TBXAS1P24557 533 aaPredicted RBP7.55□□□□□ -1.2
NUP54-215ENST00000514313 PPP3CCP48454 512 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 PNLIPRP2P54317 469 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 GAD2Q05329 585 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 ITGADQ13349 1161 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 KRT24Q2M2I5 525 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 TRILQ7L0X0 811 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 PLPPR4Q7Z2D5 763 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 AACSQ86V21 672 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 VSIG1Q86XK7 387 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 GALNT16Q8N428 558 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 SYT2Q8N9I0 419 aaPredicted RBP7.55□□□□□ -1.2
NUP54-215ENST00000514313 ZBTB8BQ8NAP8 495 aaPredicted RBP7.55□□□□□ -1.2
NUP54-215ENST00000514313 APPL2Q8NEU8 664 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 BEST2Q8NFU1 509 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 IGSF8Q969P0 613 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 ZNF333Q96JL9 665 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 GAD1Q99259 594 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 SEPT5Q99719 369 aaPredicted RBP7.55□□□□□ -1.2
NUP54-215ENST00000514313 ALDH8A1Q9H2A2 487 aaPredicted RBP7.55□□□□□ -1.2
NUP54-215ENST00000514313 MRGBPQ9NV56 204 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 TRPV2Q9Y5S1 764 aa7.55□□□□□ -1.2
NUP54-215ENST00000514313 C1orf226A1L170 272 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 H3BQ06 376 aaPredicted RBP7.54□□□□□ -1.2
NUP54-215ENST00000514313 CHL1O00533 1208 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 TBX10O75333 385 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 MYZAPP0CAP1 466 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 CHRNB1P11230 501 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 ATP5F1P24539 256 aaPredicted RBP7.54□□□□□ -1.2
NUP54-215ENST00000514313 MRPS5P82675 430 aaKnown RBP7.54□□□□□ -1.2
NUP54-215ENST00000514313 TFAP4Q01664 338 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 SLC10A2Q12908 348 aaPredicted RBP7.54□□□□□ -1.2
NUP54-215ENST00000514313 FOXF2Q12947 444 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 C2orf68Q2NKX9 166 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 TMEM198Q66K66 360 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 LINGO2Q7L985 606 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 RBFAQ8N0V3 343 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 DUSP19Q8WTR2 217 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 TMEM18Q96B42 140 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 KLHL31Q9H511 634 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 PAG1Q9NWQ8 432 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 CISD1Q9NZ45 108 aaKnown RBP7.54□□□□□ -1.2
NUP54-215ENST00000514313 C5AR2Q9P296 337 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 DMRT1Q9Y5R6 373 aa7.54□□□□□ -1.2
NUP54-215ENST00000514313 A0A1W2PPC1 479 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 STMND1H3BQB6 276 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 AFPP02771 609 aaKnown RBP7.53□□□□□ -1.2
NUP54-215ENST00000514313 PRKCGP05129 697 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 ENO3P13929 434 aaPredicted RBP7.53□□□□□ -1.2
NUP54-215ENST00000514313 TRIM21P19474 475 aaKnown RBP7.53□□□□□ -1.2
NUP54-215ENST00000514313 ANXA7P20073 488 aaKnown RBP7.53□□□□□ -1.2
NUP54-215ENST00000514313 MPGP29372 298 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 COPB2P35606 906 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 AVPR1AP37288 418 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 CAPZA2P47755 286 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 ZNF91Q05481 1191 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 BAATQ14032 418 aaPredicted RBP7.53□□□□□ -1.2
NUP54-215ENST00000514313 HEPHL1Q6MZM0 1159 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 FAM47EQ6ZV65 393 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 WDR63Q8IWG1 891 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 SFTPA2Q8IWL1 248 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 SIGLEC11Q96RL6 698 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 AGAP2Q99490 1192 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 KIFC3Q9BVG8 833 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 MRPL1Q9BYD6 325 aaKnown RBP7.53□□□□□ -1.2
NUP54-215ENST00000514313 MAP6D1Q9H9H5 199 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 CYSLTR2Q9NS75 346 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 DECR2Q9NUI1 292 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 TMEM184CQ9NVA4 438 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 ARHGEF38Q9NXL2 777 aa7.53□□□□□ -1.2
NUP54-215ENST00000514313 CWC15Q9P013 229 aaKnown RBP7.53□□□□□ -1.2
NUP54-215ENST00000514313 TMEM202A6NGA9 273 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 BCAR3O75815 825 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 PSMD10O75832 226 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 CBSLP0DN79 551 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 MMP9P14780 707 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 ACADLP28330 430 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 CBSP35520 551 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 ARHGAP25P42331 645 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 LIG4P49917 911 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 RAD23AP54725 363 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 CDH12P55289 794 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 TAS2R40P59535 323 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 ID2Q02363 134 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 FHL2Q14192 279 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 MINDY1Q8N5J2 469 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 TDRD5Q8NAT2 981 aaKnown RBP7.52□□□□□ -1.21
NUP54-215ENST00000514313 SLC44A5Q8NCS7 719 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 GPT2Q8TD30 523 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 DPF1Q92782 380 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 ERGIC1Q969X5 290 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 TMCO6Q96DC7 493 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 DGAT2Q96PD7 388 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 MSRB1Q9NZV6 116 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 ING1Q9UK53 422 aaPredicted RBP7.52□□□□□ -1.21
NUP54-215ENST00000514313 ERVK-11Q9UQG0 969 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 NFE2L3Q9Y4A8 694 aa7.52□□□□□ -1.21
NUP54-215ENST00000514313 SMIM35A0A1B0GVV1 85 aa7.51□□□□□ -1.21
NUP54-215ENST00000514313 WIPF3A6NGB9 483 aa7.51□□□□□ -1.21
NUP54-215ENST00000514313 A8MXE2 369 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms