RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CALB2P22676 271 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 TNFSF4P23510 183 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 ANXA13P27216 316 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 TKTP29401 623 aaKnown RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 HPDP32754 393 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 PHBP35232 272 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 HSPA9P38646 679 aaKnown RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 TUFMP49411 452 aaKnown RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 COPB1P53618 953 aaKnown RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 MAP3K7CLP57077 242 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 KRTAP10-11P60412 298 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 GNGT1P63211 74 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 LRRC74AQ0VAA2 488 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 GRSF1Q12849 480 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 LMAN2Q12907 356 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 LRMPQ12912 555 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 CYLC2Q14093 348 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 MORC3Q14149 939 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 KCNAB1Q14722 419 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 NR1D2Q14995 579 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 STK38Q15208 465 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 ANKRD1Q15327 319 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 BMP2KLQ5H9B9 411 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 HYIQ5T013 277 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 METTL11BQ5VVY1 283 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 RRAGBQ5VZM2 374 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 CTRB2Q6GPI1 263 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SIGIRRQ6IA17 410 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 UNC5DQ6UXZ4 953 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 DPY19L3Q6ZPD9 716 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 DCDC5Q6ZRR9 648 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 USP49Q70CQ1 688 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 RASGRP2Q7LDG7 609 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 KRT27Q7Z3Y8 459 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 BCDIN3DQ7Z5W3 292 aaKnown RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SLC51BQ86UW2 128 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 KIRREL3Q8IZU9 778 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 ARFGAP2Q8N6H7 521 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 RNF152Q8N8N0 203 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 C11orf44Q8N8P7 122 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 CNBD1Q8NA66 436 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 ATP8B4Q8TF62 1192 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 RUFY2Q8WXA3 655 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 OVCA2Q8WZ82 227 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 RMDN1Q96DB5 314 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 STAMBPL1Q96FJ0 436 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 PPP1R13BQ96KQ4 1090 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SPATA17Q96L03 361 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 CEP295NLQ96MC4 621 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 RIPOR3Q96MK2 946 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF570Q96NI8 536 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 NUDT22Q9BRQ3 303 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SHCBP1LQ9BZQ2 653 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 GBA3Q9H227 469 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SMARCAD1Q9H4L7 1026 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 C8orf33Q9H7E9 229 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 CERS4Q9HA82 394 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 USP29Q9HBJ7 922 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 FANCFQ9NPI8 374 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 PFDN4Q9NQP4 134 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 NECTIN3Q9NQS3 549 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 RXFP3Q9NSD7 469 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SAMSN1Q9NSI8 373 aaKnown RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 ARMC1Q9NVT9 282 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SLC39A1Q9NY26 324 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 TRIM10Q9UDY6 481 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SERGEFQ9UGK8 458 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SEC63Q9UGP8 760 aaKnown RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 BAIAP2L1Q9UHR4 511 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 KIAA1257Q9ULG3 409 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SNX5Q9Y5X3 404 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SLC4A4Q9Y6R1 1079 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 CASZ1Q86V15 1759 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 PCDH11XQ9BZA7 1347 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 PCDH11YQ9BZA8 1340 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 DPPA5A6NC42 116 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 SNTNA6NMZ2 147 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 RSPH10B2B2RC85 870 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 TMEM114B3SHH9 223 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 H3BNC9 293 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 GOLGA8RI6L899 631 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 PPP6CO00743 305 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 DSCR3O14972 297 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 MCF2LO15068 1137 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 DDHD2O94830 711 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 GLP2RO95838 553 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ERBB2P04626 1255 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 RSPH10BP0C881 870 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 RPS2P15880 293 aaKnown RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF3P17036 446 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 MATN1P21941 496 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 SFPQP23246 707 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 PCK1P35558 622 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CHKAP35790 457 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CBX5P45973 191 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 DIO1P49895 249 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 PLCD1P51178 756 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ADARP55265 1226 aaKnown RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 S100A12P80511 92 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CRB1P82279 1406 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms