RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 UAP1Q16222 522 aaPredicted RBP13.37□□□□□ -0.27
PRDM2-213ENST00000503842 CDKN3Q16667 212 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 UGP2Q16851 508 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 POM121L1PQ3SYA9 428 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 UBAP2Q5T6F2 1119 aaKnown RBP13.37□□□□□ -0.27
PRDM2-213ENST00000503842 FAM46CQ5VWP2 391 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 ZNF776Q68DI1 518 aaPredicted RBP13.37□□□□□ -0.27
PRDM2-213ENST00000503842 CCNJLQ8IV13 435 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.37□□□□□ -0.27
PRDM2-213ENST00000503842 TTC30BQ8N4P2 665 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 PPHLN1Q8NEY8 458 aaKnown RBP13.37□□□□□ -0.27
PRDM2-213ENST00000503842 BRSK1Q8TDC3 778 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 ERLEC1Q96DZ1 483 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 SCRN2Q96FV2 425 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 PPP1R16AQ96I34 528 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 MAGEE1Q9HCI5 957 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 HACD3Q9P035 362 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 ZC3H7BQ9UGR2 993 aaKnown RBP13.37□□□□□ -0.27
PRDM2-213ENST00000503842 MAD1L1Q9Y6D9 718 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 FAM237BA0A1B0GVD1 139 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 MAGEB16A2A368 324 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 HEATR9A2RTY3 570 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 MROH6A6NGR9 719 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 MID1O15344 667 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 LDB2O43679 373 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 RNASEH1O60930 286 aaKnown RBP13.36□□□□□ -0.27
PRDM2-213ENST00000503842 PAPSS2O95340 614 aaPredicted RBP13.36□□□□□ -0.27
PRDM2-213ENST00000503842 TTC4O95801 387 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 ALPIP09923 528 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 PGAM1P18669 254 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 PSMA3P25788 255 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 HNF1BP35680 557 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 ABL2P42684 1182 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 GPX6P59796 221 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 SIGLEC14Q08ET2 396 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 PTPRRQ15256 657 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 CRY1Q16526 586 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 KYNUQ16719 465 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 TUSC1Q2TAM9 212 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 SPDYCQ5MJ68 293 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 DENND2CQ68D51 928 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 CASC4Q6P4E1 433 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 UNC5AQ6ZN44 842 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 USP45Q70EL2 814 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 TMEM135Q86UB9 458 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 NDUFAF2Q8N183 169 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 PAF1Q8N7H5 531 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 MDGA1Q8NFP4 955 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 PJA1Q8NG27 643 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 PRR7Q8TB68 274 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 BLOC1S5Q8TDH9 187 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 TTC25Q96NG3 672 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 SRPK1Q96SB4 655 aaKnown RBP13.36□□□□□ -0.27
PRDM2-213ENST00000503842 TRIM56Q9BRZ2 755 aaKnown RBP13.36□□□□□ -0.27
PRDM2-213ENST00000503842 HDAC8Q9BY41 377 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 MKRN2Q9H000 416 aaKnown RBP13.36□□□□□ -0.27
PRDM2-213ENST00000503842 CHRDQ9H2X0 955 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 PABPC3Q9H361 631 aaKnown RBP13.36□□□□□ -0.27
PRDM2-213ENST00000503842 TRABDQ9H4I3 376 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 LRRC4CQ9HCJ2 640 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 ARFGAP3Q9NP61 516 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 PCDH12Q9NPG4 1184 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 PRDM9Q9NQV7 894 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 CHRAC1Q9NRG0 131 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 POLR3BQ9NW08 1133 aaPredicted RBP13.36□□□□□ -0.27
PRDM2-213ENST00000503842 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRDM2-213ENST00000503842 SAMD15Q9P1V8 674 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 RIMKLBQ9ULI2 386 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 ZNF711Q9Y462 761 aa13.36□□□□□ -0.27
PRDM2-213ENST00000503842 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.36□□□□□ -0.27
PRDM2-213ENST00000503842 TECTAO75443 2155 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 NPIPB15A6NHN6 443 aaPredicted RBP13.35□□□□□ -0.27
PRDM2-213ENST00000503842 AURKAO14965 403 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 SPINT1O43278 529 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 RIPK2O43353 540 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 ATG13O75143 517 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 USP1O94782 785 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 ABHD2P08910 425 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 GSTA2P09210 222 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 C5AR1P21730 350 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 DRD3P35462 400 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 HSD17B3P37058 310 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 SUOXP51687 545 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 ZNF140P52738 457 aaPredicted RBP13.35□□□□□ -0.27
PRDM2-213ENST00000503842 LAMB3Q13751 1172 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 SEPT6Q14141 434 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 FRG1Q14331 258 aaKnown RBP13.35□□□□□ -0.27
PRDM2-213ENST00000503842 TAF1AQ15573 450 aaPredicted RBP13.35□□□□□ -0.27
PRDM2-213ENST00000503842 ANKRD20A4Q4UJ75 823 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 TSTD2Q5T7W7 516 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 PIP5KL1Q5T9C9 394 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 TRIM67Q6ZTA4 783 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 ERN2Q76MJ5 926 aaKnown RBP13.35□□□□□ -0.27
PRDM2-213ENST00000503842 SYT13Q7L8C5 426 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 NLRP9Q7RTR0 991 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 GLT6D1Q7Z4J2 308 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 TMPRSS6Q8IU80 811 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 AADATQ8N5Z0 425 aa13.35□□□□□ -0.27
PRDM2-213ENST00000503842 FAM160A2Q8N612 972 aaPredicted RBP13.35□□□□□ -0.27
PRDM2-213ENST00000503842 EDAQ92838 391 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms