RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 TOP6BLQ8N6T0 577 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 DCBLD1Q8N8Z6 715 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 ACVR1CQ8NER5 493 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 FBXO27Q8NI29 283 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 CAPNS2Q96L46 248 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 S100A14Q9HCY8 104 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 BPIFA1Q9NP55 256 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 TMEM216Q9P0N5 145 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 SENP1Q9P0U3 644 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 SLC7A8Q9UHI5 535 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 PCDHGA11Q9Y5H2 935 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 CDY1Q9Y6F8 540 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 PRUNE2Q8WUY3 3088 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 ATP8B3O60423 1300 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.39□□□□□ -0.43
USP11-206ENST00000469080 AIM2O14862 343 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 FKBP6O75344 327 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 FAM58BPP0C7Q3 252 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 ITGB6P18564 788 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 OR1E1P30953 314 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 GALNT3Q14435 633 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 LINGO4Q6UY18 593 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 ELMOD1Q8N336 334 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 TMEM174Q8WUU8 243 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
USP11-206ENST00000469080 KCTD4Q8WVF5 259 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 FOXP3Q9BZS1 431 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 IPO11Q9UI26 975 aaKnown RBP12.39□□□□□ -0.43
USP11-206ENST00000469080 ATP6AP2A0A1C7CYW4 349 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 MBLAC1A4D2B0 266 aaPredicted RBP12.39□□□□□ -0.43
USP11-206ENST00000469080 C9JVG2 144 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 CFAP99D6REC4 459 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 J3KR12 359 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 TK2O00142 265 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 CA12O43570 354 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 ATP6AP2O75787 350 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 EIF2S1P05198 315 aaKnown RBP12.39□□□□□ -0.43
USP11-206ENST00000469080 NR4A2P43354 598 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 NAGLUP54802 743 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 TWF1Q12792 350 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 RALGPS2Q86X27 583 aaPredicted RBP12.39□□□□□ -0.43
USP11-206ENST00000469080 RBM15BQ8NDT2 890 aaKnown RBP12.39□□□□□ -0.43
USP11-206ENST00000469080 SKA2Q8WVK7 121 aaPredicted RBP12.39□□□□□ -0.43
USP11-206ENST00000469080 PTCD3Q96EY7 689 aaKnown RBP12.39□□□□□ -0.43
USP11-206ENST00000469080 SIGLEC10Q96LC7 697 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 WDR55Q9H6Y2 383 aaPredicted RBP12.39□□□□□ -0.43
USP11-206ENST00000469080 CAAP1Q9H8G2 361 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 NCKIPSDQ9NZQ3 722 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 SYCE1LA8MT33 242 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 CYP2C18P33260 490 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 S100A5P33763 92 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 OR1D2P34982 312 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 MLLT3P42568 568 aaPredicted RBP12.38□□□□□ -0.43
USP11-206ENST00000469080 CDK9P50750 372 aaKnown RBP12.38□□□□□ -0.43
USP11-206ENST00000469080 TBX4P57082 545 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 FKBP1BP68106 108 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 COL9A2Q14055 689 aaPredicted RBP12.38□□□□□ -0.43
USP11-206ENST00000469080 ZNF235Q14590 738 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 DEFB115Q30KQ5 88 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 ATG16L1Q676U5 607 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 ELMOD2Q8IZ81 293 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 PLD6Q8N2A8 252 aaKnown RBP12.38□□□□□ -0.43
USP11-206ENST00000469080 ACMSDQ8TDX5 336 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 OMA1Q96E52 524 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 CERS2Q96G23 380 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 FCRL3Q96P31 734 aaPredicted RBP12.38□□□□□ -0.43
USP11-206ENST00000469080 GPR62Q9BZJ7 368 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 CCSER2Q9H7U1 834 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 CDH9Q9ULB4 789 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 PLA2G4CQ9UP65 541 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 C1orf232A0A0U1RR37 186 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 A0A1B0GTW7 788 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 DAB1O75553 588 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 PARNO95453 639 aaKnown RBP12.38□□□□□ -0.43
USP11-206ENST00000469080 RAG1P15918 1043 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 MX2P20592 715 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 PTPN9P43378 593 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 KCNQ1P51787 676 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 DSC2Q02487 901 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
USP11-206ENST00000469080 DRICH1Q6PGQ1 229 aaPredicted RBP12.38□□□□□ -0.43
USP11-206ENST00000469080 STRADAQ7RTN6 431 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 HEATR4Q86WZ0 1026 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 VPS37AQ8NEZ2 397 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 TOR1AIP2Q8NFQ8 470 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 PSKH2Q96QS6 385 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 TCF12Q99081 682 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 HAUS8Q9BT25 410 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 SLC39A8Q9C0K1 460 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 IL1RL2Q9HB29 575 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 APOBEC2Q9Y235 224 aaKnown RBP12.38□□□□□ -0.43
USP11-206ENST00000469080 IFT52Q9Y366 437 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 KCTD3Q9Y597 815 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 TMX2-CTNND1H3BSU7 103 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 DCXO43602 365 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 HNRNPLP14866 589 aaKnown RBP eCLIP12.38□□□□□ -0.43
USP11-206ENST00000469080 GJA1P17302 382 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 PTPN2P17706 415 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 SLC25A3Q00325 362 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms