RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 TRIM45Q9H8W5 580 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SP140LQ9H930 580 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 ERVMER34-1Q9H9K5 563 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SEC61A2Q9H9S3 476 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 LZTFL1Q9NQ48 299 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 INTS9Q9NV88 658 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 INTS13Q9NVM9 706 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CLDND1Q9NY35 253 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMOD3Q9NYL9 352 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 USP36Q9P275 1121 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 MYOTQ9UBF9 498 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 ADD3Q9UEY8 706 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 NARFQ9UHQ1 456 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 TINAGQ9UJW2 476 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 GMEB2Q9UKD1 530 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 ITGA11Q9UKX5 1188 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 ENTPD4Q9Y227 616 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 APOBEC2Q9Y235 224 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PCDHA3Q9Y5H8 950 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 DEPDC5O75140 1603 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 ADCY9O60503 1353 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PLXNC1O60486 1568 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 CLTCQ00610 1675 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ROBO1Q9Y6N7 1651 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 A2MP01023 1474 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 A0A0U1RQV5 110 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PVALEFA0A1B0GWK0 134 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 FUOMA2VDF0 154 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 CCDC151A5D8V7 595 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 EFCAB10A6NFE3 127 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ERVV-1B6SEH8 477 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PRSS44E7EML9 344 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PSMD11O00231 422 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 FPGTO14772 594 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PSMA7O14818 248 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PPEF2O14830 753 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ATP2A1O14983 1001 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 SYN3O14994 580 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PGRMC2O15173 223 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 CYTIPO60759 359 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PHF2O75151 1096 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PTP4A3O75365 173 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TFRCP02786 760 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 CSTBP04080 98 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 STAG3L3P0CL85 134 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PYGMP11217 842 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 KRT5P13647 590 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ITGAXP20702 1163 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ITGB8P26012 769 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PCSK1P29120 753 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 MAT2AP31153 395 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TLX1P31314 330 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 NUDT1P36639 197 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 LTBRP36941 435 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 MAGEA4P43358 317 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PIP4K2AP48426 406 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ANXA11P50995 505 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 RAP1GDS1P52306 607 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 CDH6P55285 790 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 STX17P56962 302 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TAS2R40P59535 323 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TRA2BP62995 288 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 GPM6BQ13491 265 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ACVR2BQ13705 512 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 DDX39BQ13838 428 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 ARHGAP44Q17R89 818 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 SKIDA1Q1XH10 827 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TBRG1Q3YBR2 411 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 LACTB2Q53H82 288 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMEM31Q5JXX7 168 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 SNRNP48Q6IEG0 339 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 DUS1LQ6P1R4 473 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 NOTUMQ6P988 496 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 MSANTD1Q6ZTZ1 278 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TRPM8Q7Z2W7 1104 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 RABEPKQ7Z6M1 372 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 DSG4Q86SJ6 1040 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TLK2Q86UE8 772 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TICAM1Q8IUC6 712 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 KRT78Q8N1N4 520 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 KBTBD3Q8NAB2 608 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 MINDY2Q8NBR6 621 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 KCTD6Q8NC69 237 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 GLB1L3Q8NCI6 653 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 C11orf65Q8NCR3 313 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TRPV3Q8NET8 790 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 Q8NFD4 153 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 OR52M1Q8NGK5 317 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC35G2Q8TBE7 412 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 NELFBQ8WX92 580 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 CLEC4DQ8WXI8 215 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 STAMQ92783 540 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 FAM122AQ96E09 287 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 RRP36Q96EU6 259 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 MASTLQ96GX5 879 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 C1orf159Q96HA4 380 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 PDLIM5Q96HC4 596 aaKnown RBP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 FUBP3Q96I24 572 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 AJUBAQ96IF1 538 aa4.78□□□□□ -1.64
HMGB3P9-201ENST00000441799 TAAR9Q96RI9 348 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms