RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 MED8Q96G25 268 aa17.72■□□□□ 0.43
SNED1-204ENST00000401884 CIB1Q99828 191 aa17.72■□□□□ 0.43
SNED1-204ENST00000401884 PAIP2BQ9ULR5 123 aaKnown RBP17.72■□□□□ 0.43
SNED1-204ENST00000401884 UBR2Q8IWV8 1755 aa17.72■□□□□ 0.43
SNED1-204ENST00000401884 C1orf232A0A0U1RR37 186 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 ZBTB14O43829 449 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 DUSP11O75319 330 aaKnown RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 TOP3BO95985 862 aaKnown RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 PRKAR2AP13861 404 aaKnown RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 CAMK2GQ13555 558 aaPredicted RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 ACTRT2Q8TDY3 377 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 SPATA16Q9BXB7 569 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 SLC39A8Q9C0K1 460 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 NOL11Q9H8H0 719 aaKnown RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 ZNHIT2Q9UHR6 403 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 GNEQ9Y223 722 aaKnown RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 NEMP2A6NFY4 417 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 OR6C75A6NL08 312 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 MC4RP32245 332 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 NEK2P51955 445 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 TMEM132CQ8N3T6 1108 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 UBR7Q8N806 425 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 ROGDIQ9GZN7 287 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 PNPLA8Q9NP80 782 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 CYTH4Q9UIA0 394 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 NDST3O95803 873 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 F7P08709 466 aaPredicted RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 ALOX15P16050 662 aaPredicted RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 HTR7P34969 479 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 RPL38P63173 70 aaKnown RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 CAND1Q86VP6 1230 aaKnown RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 RTL3Q8N8U3 475 aaKnown RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 FAM156AQ8NDB6 213 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 WDR60Q8WVS4 1066 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 HAPLN2Q9GZV7 340 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 PDLIM7Q9NR12 457 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 CNTN6Q9UQ52 1028 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 TIMM22Q9Y584 194 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 RECQL5O94762 991 aaPredicted RBP17.71■□□□□ 0.43
SNED1-204ENST00000401884 KCNH1O95259 989 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 IRF8Q02556 426 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 FBXO48Q5FWF7 155 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 PPP1R15BQ5SWA1 713 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 TSTD2Q5T7W7 516 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 TMEM198Q66K66 360 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 PLEKHA8Q96JA3 519 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 PPP3R2Q96LZ3 170 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 DYRK1BQ9Y463 629 aa17.71■□□□□ 0.43
SNED1-204ENST00000401884 ABCB1P08183 1280 aaPredicted RBP17.7■□□□□ 0.42
SNED1-204ENST00000401884 CTPS1P17812 591 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 GRK4P32298 578 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 OR1D2P34982 312 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 IRF9Q00978 393 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 PABPC1LQ4VXU2 614 aaKnown RBP17.7■□□□□ 0.42
SNED1-204ENST00000401884 LIN52Q52LA3 116 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 MTX3Q5HYI7 312 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 ZNF618Q5T7W0 954 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 BBS7Q8IWZ6 715 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 USP29Q9HBJ7 922 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 C10orf71Q711Q0 1435 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 E7ESA3 106 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 RPP40O75818 363 aaKnown RBP17.7■□□□□ 0.42
SNED1-204ENST00000401884 PKMP14618 531 aaKnown RBP17.7■□□□□ 0.42
SNED1-204ENST00000401884 PRDX6P30041 224 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 SERPINB1P30740 379 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 CHI3L1P36222 383 aaPredicted RBP17.7■□□□□ 0.42
SNED1-204ENST00000401884 NAA20P61599 178 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 TNK2Q07912 1038 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 DCTN2Q13561 401 aaKnown RBP17.7■□□□□ 0.42
SNED1-204ENST00000401884 CPSF6Q16630 551 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNED1-204ENST00000401884 TXNDC11Q6PKC3 985 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 FAM47BQ8NA70 645 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 FTHL17Q9BXU8 183 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 TYMPP19971 482 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 GSSP48637 474 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 CLDN10P78369 228 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 OLIG2Q13516 323 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 ITGA7Q13683 1181 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 PARP15Q460N3 678 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 TRIM60Q495X7 471 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 SLC9B1Q4ZJI4 515 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 TTC23Q5W5X9 447 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 GCNT7Q6ZNI0 430 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 SLC24A5Q71RS6 500 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 DCBLD1Q8N8Z6 715 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 EMID1Q96A84 441 aaPredicted RBP17.7■□□□□ 0.42
SNED1-204ENST00000401884 DGCR14Q96DF8 476 aaKnown RBP17.7■□□□□ 0.42
SNED1-204ENST00000401884 HOPXQ9BPY8 73 aaPredicted RBP17.7■□□□□ 0.42
SNED1-204ENST00000401884 GLTPD2A6NH11 291 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 SLC22A3O75751 556 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 DLDP09622 509 aaKnown RBP17.7■□□□□ 0.42
SNED1-204ENST00000401884 GPC1P35052 558 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 TMED10P49755 219 aaKnown RBP17.7■□□□□ 0.42
SNED1-204ENST00000401884 SPESP1Q6UW49 350 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 PSMG2Q969U7 264 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 MAGED4Q96JG8 741 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 PNPLA3Q9NST1 481 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 TEKT2Q9UIF3 430 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 TMCC3Q9ULS5 477 aa17.7■□□□□ 0.42
SNED1-204ENST00000401884 MFHAS1Q9Y4C4 1052 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms