RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 SYBUQ9NX95 663 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 KCTD3Q9Y597 815 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 ARL5AQ9Y689 179 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 CUL9Q8IWT3 2517 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 TBC1D3DA0A087WVF3 549 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 TBC1D3IA0A087WXS9 549 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 TBC1D3EA0A087X179 549 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 TBC1D3KA0A087X1G2 549 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 TBC1D3FA6NER0 549 aaPredicted RBP18.73■□□□□ 0.59
TSSC4-201ENST00000333256 TBC1D3LB9A6J9 549 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 MMP20O60882 483 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 IGLV3-19P01714 112 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 TBC1D3HP0C7X1 549 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 CYP2A6P11509 494 aaPredicted RBP18.73■□□□□ 0.59
TSSC4-201ENST00000333256 ECHS1P30084 290 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 LIG3P49916 1009 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 PTPRCAPQ14761 206 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 CNGA3Q16281 694 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 HIF1AQ16665 826 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 CDKN3Q16667 212 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 BBS9Q3SYG4 887 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 TBC1D3GQ6DHY5 549 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 TBC1D3CQ6IPX1 549 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 GSPT2Q8IYD1 628 aaKnown RBP18.73■□□□□ 0.59
TSSC4-201ENST00000333256 TBC1D3Q8IZP1 549 aaPredicted RBP18.73■□□□□ 0.59
TSSC4-201ENST00000333256 TRIM56Q9BRZ2 755 aaKnown RBP18.73■□□□□ 0.59
TSSC4-201ENST00000333256 GPR63Q9BZJ6 419 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 NFU1Q9UMS0 254 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 COQ6Q9Y2Z9 468 aa18.73■□□□□ 0.59
TSSC4-201ENST00000333256 SLC7A4O43246 635 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 AP1G1O43747 822 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 ELFN1P0C7U0 828 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 MLNP12872 115 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 CD6P30203 668 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 HOXA6P31267 233 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 MAGEA3P43357 314 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 SUOXP51687 545 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 PPP2CBP62714 309 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 PPP2CAP67775 309 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 SRSF5Q13243 272 aaKnown RBP18.72■□□□□ 0.59
TSSC4-201ENST00000333256 ARHGEF7Q14155 803 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 ANGPT1Q15389 498 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 SEL1L3Q68CR1 1132 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 LIPIQ6XZB0 460 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 CCDC25Q86WR0 208 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 PDIK1LQ8N165 341 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 ZCCHC9Q8N567 271 aaKnown RBP18.72■□□□□ 0.59
TSSC4-201ENST00000333256 KLK6Q92876 244 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 LYSMD1Q96S90 227 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 GPR174Q9BXC1 333 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 ZFYVE1Q9HBF4 777 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 WSB2Q9NYS7 404 aaPredicted RBP18.72■□□□□ 0.59
TSSC4-201ENST00000333256 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.72■□□□□ 0.59
TSSC4-201ENST00000333256 BFARQ9NZS9 450 aa18.72■□□□□ 0.59
TSSC4-201ENST00000333256 SMAPO00193 183 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 NDC80O14777 642 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 SEMA4FO95754 770 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 NFKBIAP25963 317 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 MAT2AP31153 395 aaKnown RBP18.71■□□□□ 0.59
TSSC4-201ENST00000333256 ARL4CP56559 192 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 TUBB4BP68371 445 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 CAV1Q03135 178 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 PTSQ03393 145 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 DHX9Q08211 1270 aaKnown RBP18.71■□□□□ 0.59
TSSC4-201ENST00000333256 USP39Q53GS9 565 aaKnown RBP18.71■□□□□ 0.59
TSSC4-201ENST00000333256 CASC4Q6P4E1 433 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 RFLNAQ6ZTI6 216 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 TTC30BQ8N4P2 665 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 DEFB119Q8N690 84 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 BRSK1Q8TDC3 778 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 CXorf40AQ8TE69 158 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 ZNF778Q96MU6 729 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 C6orf106Q9H6K1 298 aaPredicted RBP18.71■□□□□ 0.59
TSSC4-201ENST00000333256 SGK2Q9HBY8 427 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 BPIFA1Q9NP55 256 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 CHRAC1Q9NRG0 131 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 MBD1Q9UIS9 605 aaPredicted RBP18.71■□□□□ 0.59
TSSC4-201ENST00000333256 FBXO4Q9UKT5 387 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 ZFR2Q9UPR6 939 aaKnown RBP18.71■□□□□ 0.59
TSSC4-201ENST00000333256 MAD1L1Q9Y6D9 718 aa18.71■□□□□ 0.59
TSSC4-201ENST00000333256 IGLON5A6NGN9 336 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 TSPAN6O43657 245 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 RNGTTO60942 597 aaKnown RBP18.7■□□□□ 0.58
TSSC4-201ENST00000333256 C1SP09871 688 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 MYBL2P10244 700 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 BCKDHBP21953 392 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 NPY2RP49146 381 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 PDIA2Q13087 525 aaKnown RBP18.7■□□□□ 0.58
TSSC4-201ENST00000333256 CUL1Q13616 776 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 FASTKD3Q14CZ7 662 aaKnown RBP18.7■□□□□ 0.58
TSSC4-201ENST00000333256 TMEM52BQ4KMG9 183 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 MICALCLQ6ZW33 695 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 HSD11B1LQ7Z5J1 315 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 C1QTNF1Q9BXJ1 281 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 IL22Q9GZX6 179 aa18.7■□□□□ 0.58
TSSC4-201ENST00000333256 FNDC3AQ9Y2H6 1198 aaKnown RBP18.7■□□□□ 0.58
TSSC4-201ENST00000333256 A0A1W2PQU0 124 aa18.69■□□□□ 0.58
TSSC4-201ENST00000333256 SDR42E2A6NKP2 422 aa18.69■□□□□ 0.58
TSSC4-201ENST00000333256 AP3B1O00203 1094 aa18.69■□□□□ 0.58
TSSC4-201ENST00000333256 CCL22O00626 93 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms