RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 C5P01031 1676 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 PPEF2O14830 753 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 COL6A2P12110 1019 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 PSEN1P49768 467 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 XIAPP98170 497 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 POM121L1PQ3SYA9 428 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 REEP1Q9H902 201 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 MYH10P35580 1976 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 KPNA3O00505 521 aaPredicted RBP17.26■□□□□ 0.35
GABRB3-202ENST00000311550 SLC22A3O75751 556 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 RECQL5O94762 991 aaPredicted RBP17.26■□□□□ 0.35
GABRB3-202ENST00000311550 GRK4P32298 578 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 PFKPQ01813 784 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 ITGADQ13349 1161 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 METTL21CQ5VZV1 264 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 TCAF1Q9Y4C2 921 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 POLR3HQ9Y535 204 aaPredicted RBP17.26■□□□□ 0.35
GABRB3-202ENST00000311550 LRATO95237 230 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 DAOAP59103 153 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 ACBD5Q5T8D3 534 aaPredicted RBP17.26■□□□□ 0.35
GABRB3-202ENST00000311550 ERAP2Q6P179 960 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 PHACTR4Q8IZ21 702 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 UCMAQ8WVF2 138 aa17.26■□□□□ 0.35
GABRB3-202ENST00000311550 RSL24D1Q9UHA3 163 aaKnown RBP17.26■□□□□ 0.35
GABRB3-202ENST00000311550 FAM149AA5PLN7 773 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 MT-ND1P03886 318 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 IMPDH2P12268 514 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 IDH2P48735 452 aaKnown RBP17.25■□□□□ 0.35
GABRB3-202ENST00000311550 USP45Q70EL2 814 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 MTERF3Q96E29 417 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 PPP3R2Q96LZ3 170 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 TRMOQ9BU70 441 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.25■□□□□ 0.35
GABRB3-202ENST00000311550 H3BN98 237 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 CST1P01037 141 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 VAV1P15498 845 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 TRAF7Q6Q0C0 670 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 PGAM4Q8N0Y7 254 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 PARP8Q8N3A8 854 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 C12orf42Q96LP6 360 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 LRP6O75581 1613 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 KRT75O95678 551 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 HDCP19113 662 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 TTC23Q5W5X9 447 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 ADCY4Q8NFM4 1077 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 ELMO1Q92556 727 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 CAMKK2Q96RR4 588 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 POMPQ9Y244 141 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 HCRTO43612 131 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 CCNCP24863 283 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 AQP4P55087 323 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 ZNF280AP59817 542 aaPredicted RBP17.25■□□□□ 0.35
GABRB3-202ENST00000311550 RPS7P62081 194 aaKnown RBP17.25■□□□□ 0.35
GABRB3-202ENST00000311550 DUSP4Q13115 394 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 TYW3Q6IPR3 259 aaKnown RBP17.25■□□□□ 0.35
GABRB3-202ENST00000311550 KBTBD2Q8IY47 623 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 CCDC28BQ9BUN5 200 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 EBF3Q9H4W6 596 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 CLK4Q9HAZ1 481 aaKnown RBP17.25■□□□□ 0.35
GABRB3-202ENST00000311550 H3BMM5 538 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 MAP3K13O43283 966 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 ANXA6P08133 673 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 ADAMTSL2Q86TH1 951 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 CIR1Q86X95 450 aaPredicted RBP17.25■□□□□ 0.35
GABRB3-202ENST00000311550 HEXDCQ8WVB3 486 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 SLC7A8Q9UHI5 535 aa17.25■□□□□ 0.35
GABRB3-202ENST00000311550 ECHS1P30084 290 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 TRIM25Q14258 630 aaKnown RBP17.24■□□□□ 0.35
GABRB3-202ENST00000311550 SLC9B1Q4ZJI4 515 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 INTS6LQ5JSJ4 861 aaKnown RBP17.24■□□□□ 0.35
GABRB3-202ENST00000311550 CLHC1Q8NHS4 586 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 PPM1MQ96MI6 270 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 NUP188Q5SRE5 1749 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 SCN11AQ9UI33 1791 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 TBX10O75333 385 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 OTCP00480 354 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 CRATP43155 626 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 TAS2R39P59534 338 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 KCNJ11Q14654 390 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 ZNF549Q6P9A3 640 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 DOK6Q6PKX4 331 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 CCNHP51946 323 aaPredicted RBP17.24■□□□□ 0.35
GABRB3-202ENST00000311550 SMAD3P84022 425 aaKnown RBP17.24■□□□□ 0.35
GABRB3-202ENST00000311550 MPP2Q14168 576 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 BROXQ5VW32 411 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 ARHGAP17Q68EM7 881 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 TWIST2Q8WVJ9 160 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 PADI3Q9ULW8 664 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 FAM220BPB1ANY3 271 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 ABLIM1O14639 778 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 PCDH8O95206 1070 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 CHRNA4P43681 627 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 BLVRAP53004 296 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 PLCL1Q15111 1095 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 TARBP2Q15633 366 aaKnown RBP17.24■□□□□ 0.35
GABRB3-202ENST00000311550 NCBP2-AS2Q69YL0 99 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 RALGPS2Q86X27 583 aaPredicted RBP17.24■□□□□ 0.35
GABRB3-202ENST00000311550 HOMEZQ8IX15 550 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 PCDH12Q9NPG4 1184 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms