RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 VWA8A3KMH1 1905 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 GREB1Q4ZG55 1949 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 CCDC189A1A4V9 331 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 RTN3O95197 1032 aaPredicted RBP25.13■■□□□ 1.61
ROM1-201ENST00000278833 OGNP20774 298 aaKnown RBP25.13■■□□□ 1.61
ROM1-201ENST00000278833 HSPA13P48723 471 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 ACADVLP49748 655 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 SERINC3Q13530 473 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 KCNA10Q16322 511 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 MMEL1Q495T6 779 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 ZNF280DQ6N043 979 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 UGT2A3Q6UWM9 527 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 RIN3Q8TB24 985 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 ZNF599Q96NL3 588 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 CENPKQ9BS16 269 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 EPB41L1Q9H4G0 881 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.13■■□□□ 1.61
ROM1-201ENST00000278833 PCDHGA7Q9Y5G6 932 aa25.13■■□□□ 1.61
ROM1-201ENST00000278833 CNTN5O94779 1100 aa25.12■■□□□ 1.61
ROM1-201ENST00000278833 C8BP07358 591 aa25.12■■□□□ 1.61
ROM1-201ENST00000278833 TRAP1Q12931 704 aaKnown RBP25.12■■□□□ 1.61
ROM1-201ENST00000278833 LRP8Q14114 963 aa25.12■■□□□ 1.61
ROM1-201ENST00000278833 MRPL58Q14197 206 aaKnown RBP25.12■■□□□ 1.61
ROM1-201ENST00000278833 C8orf82Q6P1X6 216 aaPredicted RBP25.12■■□□□ 1.61
ROM1-201ENST00000278833 GALNT15Q8N3T1 639 aa25.12■■□□□ 1.61
ROM1-201ENST00000278833 ANKRD49Q8WVL7 239 aa25.12■■□□□ 1.61
ROM1-201ENST00000278833 NCSTNQ92542 709 aa25.12■■□□□ 1.61
ROM1-201ENST00000278833 PSMG2Q969U7 264 aa25.12■■□□□ 1.61
ROM1-201ENST00000278833 SGF29Q96ES7 293 aa25.12■■□□□ 1.61
ROM1-201ENST00000278833 G3BP2Q9UN86 482 aaKnown RBP25.12■■□□□ 1.61
ROM1-201ENST00000278833 UBDO15205 165 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 HNRNPLP14866 589 aaKnown RBP eCLIP25.11■■□□□ 1.61
ROM1-201ENST00000278833 CHN2P52757 468 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 USP46P62068 366 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 MS4A2Q01362 244 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 PDK3Q15120 406 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 GRAMD1BQ3KR37 738 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 C5orf22Q49AR2 442 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 CLLU1OSQ5K130 101 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 ZNF678Q5SXM1 525 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 FBXL22Q6P050 247 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 TFAP2DQ7Z6R9 452 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 ISCA2Q86U28 154 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 PGBD5Q8N414 524 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 BHLHE22Q8NFJ8 381 aaPredicted RBP25.11■■□□□ 1.61
ROM1-201ENST00000278833 ZNF483Q8TF39 744 aaPredicted RBP25.11■■□□□ 1.61
ROM1-201ENST00000278833 DIS3LQ8TF46 1054 aaKnown RBP25.11■■□□□ 1.61
ROM1-201ENST00000278833 LRGUKQ96M69 825 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 KLHL5Q96PQ7 755 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 UXTQ9UBK9 157 aaPredicted RBP25.11■■□□□ 1.61
ROM1-201ENST00000278833 OR6C75A6NL08 312 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 H0YJX3 145 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 TRIM24O15164 1050 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 RAMP2O60895 175 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 ZCCHC18P0CG32 403 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 ARSDP51689 593 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 PSME3P61289 254 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 PRAMEP78395 509 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 FOLH1Q04609 750 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 LIN52Q52LA3 116 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 SLC24A5Q71RS6 500 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 ZNF280BQ86YH2 543 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 PCSK9Q8NBP7 692 aaKnown RBP25.11■■□□□ 1.61
ROM1-201ENST00000278833 IGSF8Q969P0 613 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 HDAC10Q969S8 669 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 MARK4Q96L34 752 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 POLR1EQ9GZS1 481 aaKnown RBP25.11■■□□□ 1.61
ROM1-201ENST00000278833 CACNA2D2Q9NY47 1150 aa25.11■■□□□ 1.61
ROM1-201ENST00000278833 TTC3P53804 2025 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 PRAMEF11O60813 436 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 YWHAQP27348 245 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 CDKN2DP55273 166 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 MAXP61244 160 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 MRPS22P82650 360 aaKnown RBP25.1■■□□□ 1.61
ROM1-201ENST00000278833 LRRC36Q1X8D7 754 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 SLC30A9Q6PML9 568 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 TMEM207Q6UWW9 146 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 GK5Q6ZS86 529 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 RHEBL1Q8TAI7 183 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 PABPC5Q96DU9 382 aaKnown RBP25.1■■□□□ 1.61
ROM1-201ENST00000278833 SLC25A23Q9BV35 468 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 SUDS3Q9H7L9 328 aaPredicted RBP25.1■■□□□ 1.61
ROM1-201ENST00000278833 PDFQ9HBH1 243 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 SLC24A3Q9HC58 644 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 TRAF6Q9Y4K3 522 aa25.1■■□□□ 1.61
ROM1-201ENST00000278833 PSMD12O00232 456 aaPredicted RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 FGF4P08620 206 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 PABPC4LP0CB38 370 aaKnown RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 COL6A1P12109 1028 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 PSMA3P25788 255 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 GPR15P49685 360 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 PKNOX1P55347 436 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 HERVK_113P63132 956 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 FASTKQ14296 549 aaKnown RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 DDR2Q16832 855 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 VARS2Q5ST30 1063 aaKnown RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 REP15Q6BDI9 236 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 FBXL19Q6PCT2 694 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 LARP4Q71RC2 724 aaKnown RBP eCLIP25.09■■□□□ 1.61
ROM1-201ENST00000278833 KDELC2Q7Z4H8 507 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms