RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 HACD2Q6Y1H2 254 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 RIN3Q8TB24 985 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 FAM45AQ8TCE6 357 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 PABPC5Q96DU9 382 aaKnown RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 DUS3LQ96G46 650 aaKnown RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 SUSD3Q96L08 255 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 MARCH4Q9P2E8 410 aaPredicted RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 PADI3Q9ULW8 664 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 SCN10AQ9Y5Y9 1956 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 TTC24A2A3L6 582 aaPredicted RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 OR51F1A6NGY5 319 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 F8W810 466 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 PSMC3P17980 439 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 SLC7A1P30825 629 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 CD52P31358 61 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 PRAMEP78395 509 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 MGAT3Q09327 533 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 APOFQ13790 326 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 MAP7Q14244 749 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 GNASQ5JWF2 1037 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 SAMD4BQ5PRF9 694 aaKnown RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 CXCL17Q6UXB2 119 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 CYP2R1Q6VVX0 501 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 HERC6Q8IVU3 1022 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 SCN4BQ8IWT1 228 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 ZNF683Q8IZ20 524 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 SH3RF2Q8TEC5 729 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 DDI1Q8WTU0 396 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 FATE1Q969F0 183 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 SLC39A13Q96H72 371 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 ZNF597Q96LX8 424 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 C3orf30Q96M34 536 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 MTG1Q9BT17 334 aaPredicted RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 RBM38Q9H0Z9 239 aaKnown RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 FBRSL1Q9HCM7 1045 aaKnown RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 PRDM5Q9NQX1 630 aaPredicted RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 HACD3Q9P035 362 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 TLR6Q9Y2C9 796 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 MTF2Q9Y483 593 aaPredicted RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 SPATA31D3P0C874 917 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 RHOQP17081 205 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 ACADVLP49748 655 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 ATP4BP51164 291 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 IKBKEQ14164 716 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 MYLK3Q32MK0 819 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 UGT3A2Q3SY77 523 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 SIRPB2Q5JXA9 342 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 C6orf10Q5SRN2 563 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 KLHDC10Q6PID8 442 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 SPATA31D4Q6ZUB0 917 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 FUNDC1Q8IVP5 155 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 CHERPQ8IWX8 916 aaKnown RBP15.27■□□□□ 0.04
DDX56-201ENST00000258772 ZFP28Q8NHY6 868 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 MPP4Q96JB8 637 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 ETAA1Q9NY74 926 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 PTTG2Q9NZH5 202 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 CRYL1Q9Y2S2 319 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 KCTD3Q9Y597 815 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 SNX13Q9Y5W8 968 aa15.27■□□□□ 0.04
DDX56-201ENST00000258772 A0A0U1RQF3 1178 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 SRP72O76094 671 aaKnown RBP15.27■□□□□ 0.03
DDX56-201ENST00000258772 CNTN5O94779 1100 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 ALDOCP09972 364 aaKnown RBP15.27■□□□□ 0.03
DDX56-201ENST00000258772 OR4Q2P0C623 313 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 TYMPP19971 482 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 HERVK_113P63132 956 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 ALFQ53S48 1182 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 PIM3Q86V86 326 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 SERINC5Q86VE9 423 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 CLYBLQ8N0X4 340 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 PSMG2Q969U7 264 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 PTERQ96BW5 349 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 C19orf60Q96EN9 201 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 UHRF1Q96T88 793 aaPredicted RBP15.27■□□□□ 0.03
DDX56-201ENST00000258772 ERVK-6Q9BXR3 956 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 ZYG11BQ9C0D3 744 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 SP110Q9HB58 689 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 SPON1Q9HCB6 807 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 TMEM248Q9NWD8 314 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 UXTQ9UBK9 157 aaPredicted RBP15.27■□□□□ 0.03
DDX56-201ENST00000258772 PADI4Q9UM07 663 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 RNF11Q9Y3C5 154 aa15.27■□□□□ 0.03
DDX56-201ENST00000258772 IQCA1LA6NCM1 817 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 LDB2O43679 373 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 KPNA6O60684 536 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 TRPA1O75762 1119 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 AKR1A1P14550 325 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 GPX3P22352 226 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 PAX3P23760 479 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 SLC7A2P52569 658 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 CDH13P55290 713 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 FKBP1BP68106 108 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 TXNL4AP83876 142 aaKnown RBP15.26■□□□□ 0.03
DDX56-201ENST00000258772 NFKB2Q00653 900 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 YWHAHQ04917 246 aaPredicted RBP15.26■□□□□ 0.03
DDX56-201ENST00000258772 MS4A13Q5J8X5 152 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 AMIGO2Q86SJ2 522 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 MON1AQ86VX9 555 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 TEX26Q8N6G2 289 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 OR52K2Q8NGK3 314 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms