RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 SLC39A14Q15043 492 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 CHRNA6Q15825 494 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 ALFQ53S48 1182 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 TMEM270Q6UE05 265 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 LRRC31Q6UY01 552 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 GDPD4Q6W3E5 623 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 SPNS3Q6ZMD2 512 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 TFAP2DQ7Z6R9 452 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 SLC47A2Q86VL8 602 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 PLPP6Q8IY26 295 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 OR7D4Q8NG98 312 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 C19orf60Q96EN9 201 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 STAMBPL1Q96FJ0 436 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 GSDMCQ9BYG8 508 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 FGF22Q9HCT0 170 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 ATP13A1Q9HD20 1204 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 APMAPQ9HDC9 416 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 COQ6Q9Y2Z9 468 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 SPG11Q96JI7 2443 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 TNFRSF10CO14798 259 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 PPP6R2O75170 966 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 CCNYL3P0C7X3 344 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 CCNB1P14635 433 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 TBXAS1P24557 533 aaPredicted RBP11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 BRD2P25440 801 aaKnown RBP11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 NFKBIAP25963 317 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 RPL13P26373 211 aaKnown RBP11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 STAT1P42224 750 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 SNRPD1P62314 119 aaKnown RBP11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 CDK18Q07002 472 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 ELP6Q0PNE2 266 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 EIF4EBP2Q13542 120 aaPredicted RBP11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 CUL4BQ13620 913 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 RAPGEF1Q13905 1077 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 ZRSR2Q15696 482 aaKnown RBP11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 MYLK3Q32MK0 819 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 C5orf22Q49AR2 442 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 ANKRD40Q6AI12 368 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 C17orf82Q86X59 251 aaPredicted RBP11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 RHOT1Q8IXI2 618 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 IQCKQ8N0W5 287 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 Q8NA96 180 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 OR10G6Q8NH81 332 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 THAP4Q8WY91 577 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 SEC14L1Q92503 715 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 PNPLA2Q96AD5 504 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 ISG20Q96AZ6 181 aaKnown RBP11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 SNRNP40Q96DI7 357 aaKnown RBP11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 THAP9Q9H5L6 903 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 SUDS3Q9H7L9 328 aaPredicted RBP11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 MLXIPLQ9NP71 852 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 LATS2Q9NRM7 1088 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 TAAR2Q9P1P5 351 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 PCDHGB7Q9Y5F8 929 aa11.05□□□□□ -0.64
PTP4A1-207ENST00000639568 ILVBLA1L0T0 632 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 PPM1DO15297 605 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 LRRTM2O43300 516 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 ITIH2P19823 946 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 ITGA3P26006 1051 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 PTGER4P35408 488 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 KIAA1024LP59773 190 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 RAD51Q06609 339 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 FOXM1Q08050 763 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 EFHC1Q5JVL4 640 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 PAPD7Q5XG87 772 aaKnown RBP11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 SLC6A19Q695T7 634 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 FAM173BQ6P4H8 233 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 ZNF783Q6ZMS7 281 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 HPS6Q86YV9 775 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 MMP21Q8N119 569 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 GALNT6Q8NCL4 622 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 KIAA0895Q8NCT3 520 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 OR2AP1Q8NGE2 309 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 TMX3Q96JJ7 454 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 SLC38A3Q99624 504 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 ING2Q9H160 280 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 CARS2Q9HA77 564 aaKnown RBP11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 ASF1BQ9NVP2 202 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 PDP2Q9P2J9 529 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 TRAF3IP3Q9Y228 551 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 PCDHB4Q9Y5E5 795 aa11.04□□□□□ -0.64
PTP4A1-207ENST00000639568 PRSS38A1L453 326 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 ZSCAN5CA6NGD5 496 aaPredicted RBP11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 ARGFXA6NJG6 315 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 PDE2AO00408 941 aaPredicted RBP11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 POLR2DO15514 142 aaKnown RBP11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 ZMPSTE24O75844 475 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 GSRP00390 522 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 BMP6P22004 513 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 CLCN1P35523 988 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 SUOXP51687 545 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 ITGA1P56199 1179 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 GEMIN4P57678 1058 aaKnown RBP11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 ARF5P84085 180 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 LRMPQ12912 555 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 CHAF1BQ13112 559 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 ADAM9Q13443 819 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 TMEM52BQ4KMG9 183 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 SLC30A9Q6PML9 568 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms