RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 MLXQ9UH92 298 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 ZSCAN5CA6NGD5 496 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 RGS10O43665 173 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 SLC35G4P0C7Q5 338 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 FCGR1AP12314 374 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 UQCRC1P31930 480 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 ARFIP1P53367 373 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 UBE2J2Q8N2K1 259 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 ZSCAN5AQ9BUG6 496 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 FDPSP14324 419 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 ALG1LQ6GMV1 187 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 MAP3K14Q99558 947 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 PFDN2Q9UHV9 154 aa16.4■□□□□ 0.22
CACNA1A-258ENST00000638029 PTPRJQ12913 1337 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 APOC1P02654 83 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 DHPSP49366 369 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 ERVK-21P61565 698 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 MAD2L1Q13257 205 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 NFE2Q16621 373 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 SDHAF4Q5VUM1 108 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 CXXC5Q7LFL8 322 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 TDRPQ86YL5 185 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 TEX47Q8TBZ9 253 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 COX4I2Q96KJ9 171 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 ITGA11Q9UKX5 1188 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 GRIP1Q9Y3R0 1128 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 JCADQ9P266 1359 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 UNC13BO14795 1591 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 MAGI3Q5TCQ9 1506 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 C2orf71A6NGG8 1288 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 CD86P42081 329 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 FOXRED2Q8IWF2 684 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 BHLHE22Q8NFJ8 381 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 PTCD2Q8WV60 388 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 TBL1YQ9BQ87 522 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 FAM126AQ9BYI3 521 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 CKLFQ9UBR5 152 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 COPS7AQ9UBW8 275 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 IQSEC2Q5JU85 1478 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 USP12O75317 370 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 ELFN1P0C7U0 828 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 SAGP10523 405 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 CYP11B2P19099 503 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 ATP5C1P36542 298 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 MNDAP41218 407 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 GALNT5Q7Z7M9 940 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 CFAP52Q8N1V2 620 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 CADM2Q8N3J6 435 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 PHF10Q8WUB8 498 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 DNASE1L2Q92874 299 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 RADILQ96JH8 1075 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 PNPLA8Q9NP80 782 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 UBOX5O94941 541 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 GNSP15586 552 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 AHCYP23526 432 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 PIK3R6Q5UE93 754 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 ZBTB8BQ8NAP8 495 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 THRSPQ92748 146 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 UGT2B28Q9BY64 529 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 CHD4Q14839 1912 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 A0A087X0B3 334 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 ME2P23368 584 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 GRK5P34947 590 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 NPTX2P47972 431 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 SLC12A3P55017 1021 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 CYP27C1Q4G0S4 372 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 TMPRSS4Q9NRS4 437 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 RGS17Q9UGC6 210 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 FAM172BPA6NC97 362 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 MANSC4A6NHS7 340 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 PIRTP0C851 137 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 YBX3P16989 372 aaKnown RBP eCLIP16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 CHN2P52757 468 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 CRADDP78560 199 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 DNAJB14Q8TBM8 379 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 CROTQ9UKG9 612 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 PLCL2Q9UPR0 1127 aa16.39■□□□□ 0.21
CACNA1A-258ENST00000638029 SLC9A3R1O14745 358 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 LDLRP01130 860 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 PTGS2P35354 604 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 CAP2P40123 477 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 SCNN1GP51170 649 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 ZNF470Q6ECI4 717 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 APTXQ7Z2E3 356 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 UBE2Q1Q7Z7E8 422 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 LPPQ93052 612 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 PNO1Q9NRX1 252 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 MAGEB16A2A368 324 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 CCNDBP1O95273 360 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 CDH3P22223 829 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 NDST1P52848 882 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 MANFP55145 182 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 N4BP2L1Q5TBK1 243 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 OGFRL1Q5TC84 451 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 FBXO33Q7Z6M2 555 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 ZSWIM1Q9BR11 485 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 MARCH2Q9P0N8 246 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 IRAK3Q9Y616 596 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 PMF1-BGLAPU3KQ54 211 aa16.38■□□□□ 0.21
CACNA1A-258ENST00000638029 GMFBP60983 142 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms