RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 CACTIN-AS1Q8N1I8 211 aa13.22□□□□□ -0.29
HNRNPC-205ENST00000553300 ZNF548Q8NEK5 533 aaPredicted RBP13.22□□□□□ -0.29
HNRNPC-205ENST00000553300 ZNF830Q96NB3 372 aaPredicted RBP13.22□□□□□ -0.29
HNRNPC-205ENST00000553300 MAK16Q9BXY0 300 aaKnown RBP13.22□□□□□ -0.29
HNRNPC-205ENST00000553300 SLC13A1Q9BZW2 595 aa13.22□□□□□ -0.29
HNRNPC-205ENST00000553300 NOD2Q9HC29 1040 aa13.22□□□□□ -0.29
HNRNPC-205ENST00000553300 MBNL1Q9NR56 388 aaKnown RBP13.22□□□□□ -0.29
HNRNPC-205ENST00000553300 PCDHGC4Q9Y5F7 938 aa13.22□□□□□ -0.29
HNRNPC-205ENST00000553300 FREM2Q5SZK8 3169 aa13.22□□□□□ -0.29
HNRNPC-205ENST00000553300 LRRK1Q38SD2 2015 aa13.22□□□□□ -0.29
HNRNPC-205ENST00000553300 LAMA5O15230 3695 aa13.22□□□□□ -0.29
HNRNPC-205ENST00000553300 ANKRD11Q6UB99 2663 aaPredicted RBP13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 K7ESM1 405 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 FFAR2O15552 330 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 AQP9O43315 295 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 MFSD11O43934 449 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 NEBLO76041 1014 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 CYP2A6P11509 494 aaPredicted RBP13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 CKMT1AP12532 417 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 JUPP14923 745 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 ZFXP17010 805 aaPredicted RBP13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 MAGEA1P43355 309 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 PPARDQ03181 441 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 ITKQ08881 620 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 EIF2B5Q13144 721 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 INPP5AQ14642 412 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 ZNF542PQ5EBM4 170 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 ARMC12Q5T9G4 340 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 ZCCHC8Q6NZY4 707 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 SDR16C5Q8N3Y7 309 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 PGBD5Q8N414 524 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 TC2NQ8N9U0 490 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 PDCD6IPQ8WUM4 868 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 ZCCHC14Q8WYQ9 949 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 MAML1Q92585 1016 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 SCRN2Q96FV2 425 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 MRFAP1L1Q96HT8 127 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 RNF157Q96PX1 679 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 IL12RB2Q99665 862 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 APOOQ9BUR5 198 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 DDX56Q9NY93 547 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 SALL4Q9UJQ4 1053 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 COQ6Q9Y2Z9 468 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 PPIL1Q9Y3C6 166 aa13.21□□□□□ -0.29
HNRNPC-205ENST00000553300 DMXL2Q8TDJ6 3036 aa13.21□□□□□ -0.3
HNRNPC-205ENST00000553300 ACACAQ13085 2346 aa13.21□□□□□ -0.3
HNRNPC-205ENST00000553300 LRRD1A4D1F6 860 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 PSMD11O00231 422 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 RECQL5O94762 991 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 LCA5LO95447 670 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 CPP00450 1065 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 GP1BAP07359 652 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 HOXC4P09017 264 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 GIMD1P0DJR0 217 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 CCNB1P14635 433 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 CA4P22748 312 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 KELP23276 732 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 HADHBP55084 474 aaKnown RBP13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 RALGDSQ12967 914 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 SPA17Q15506 151 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 TPRG1LQ5T0D9 272 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 FAXCQ5TGI0 409 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 ALG1LQ6GMV1 187 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 CPNE8Q86YQ8 564 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 RHOT1Q8IXI2 618 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 PHACTR4Q8IZ21 702 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 FSTL5Q8N475 847 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 PQLC3Q8N755 202 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 PDCD7Q8N8D1 485 aaKnown RBP13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 TPCN2Q8NHX9 752 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 LMX1AQ8TE12 382 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 SCG3Q8WXD2 468 aaKnown RBP13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 RAPGEF5Q92565 580 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 GLMNQ92990 594 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 HDAC11Q96DB2 347 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 APOLD1Q96LR9 279 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 NT5MQ9NPB1 228 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 RBM22Q9NW64 420 aaKnown RBP eCLIP13.2□□□□□ -0.34e-23■■■■■ 28.1
HNRNPC-205ENST00000553300 B4GALT6Q9UBX8 382 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 APOBEC3BQ9UH17 382 aaKnown RBP13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 KLF15Q9UIH9 416 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 ZMIZ1Q9ULJ6 1067 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 TTC24A2A3L6 582 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 LMO7DNF2Z398 122 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 PDE2AO00408 941 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 PGLSO95336 258 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 CAPNS1P04632 268 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 VIPR1P32241 457 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 CYLC1P35663 651 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 TRIM23P36406 574 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 RPIAP49247 311 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 HK3P52790 923 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 MAXP61244 160 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 GBE1Q04446 702 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 NFATC4Q14934 902 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 ACOX1Q15067 660 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 ELOCQ15369 112 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 PRRT3Q5FWE3 981 aa13.2□□□□□ -0.3
HNRNPC-205ENST00000553300 SLC9A4Q6AI14 798 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms