RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 NIPAL4Q0D2K0 466 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 GRIK2Q13002 908 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 SGCGQ13326 291 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 FGL2Q14314 439 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 TMEM52BQ4KMG9 183 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 SLC45A4Q5BKX6 768 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 RALGPS1Q5JS13 557 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 ARMC12Q5T9G4 340 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 SEL1L2Q5TEA6 688 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 STPG1Q5TH74 334 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 MEI1Q5TIA1 1274 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 DNAJC14Q6Y2X3 702 aaPredicted RBP10.15□□□□□ -0.78
RFX3-210ENST00000457373 MINDY1Q8N5J2 469 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 CNTD1Q8N815 330 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 ARRDC2Q8TBH0 407 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 ACTL9Q8TC94 416 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 NETO1Q8TDF5 533 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 ECHDC3Q96DC8 303 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 PDLIM2Q96JY6 352 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 AGAP3Q96P47 875 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 CDV3Q9UKY7 258 aaKnown RBP10.15□□□□□ -0.78
RFX3-210ENST00000457373 PHTF1Q9UMS5 762 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 EFR3BQ9Y2G0 817 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 ANKRD6Q9Y2G4 727 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 COQ6Q9Y2Z9 468 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 PCDHB9Q9Y5E1 797 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 RAI2Q9Y5P3 530 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 SNX11Q9Y5W9 270 aa10.15□□□□□ -0.78
RFX3-210ENST00000457373 USP34Q70CQ2 3546 aa10.15□□□□□ -0.79
RFX3-210ENST00000457373 OTOGLQ3ZCN5 2332 aa10.15□□□□□ -0.79
RFX3-210ENST00000457373 A0A1W2PQ67 120 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 A0A1W2PR77 199 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 GOLGA6L9A6NEM1 432 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 GOLGA8CPA6NN73 597 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 HACD1B0YJ81 288 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 VILLO15195 856 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 RAD51BO15315 384 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 HTRA2O43464 458 aaPredicted RBP10.14□□□□□ -0.79
RFX3-210ENST00000457373 LZTS3O60299 673 aaPredicted RBP10.14□□□□□ -0.79
RFX3-210ENST00000457373 SOCS5O75159 536 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 PGLSO95336 258 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 PDHA1P08559 390 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 CTPS1P17812 591 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 CES1P23141 567 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 PTPN3P26045 913 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 RBL1P28749 1068 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 PTPN7P35236 360 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 CD86P42081 329 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 ID4P47928 161 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 CLDN2P57739 230 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 EIF3EP60228 445 aaKnown RBP10.14□□□□□ -0.79
RFX3-210ENST00000457373 IHHQ14623 411 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 PRKD1Q15139 912 aaPredicted RBP10.14□□□□□ -0.79
RFX3-210ENST00000457373 NOMO1Q15155 1222 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 RPS6KA1Q15418 735 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 KIF19Q2TAC6 998 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 TEX44Q53QW1 395 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 PRAMEF14Q5SWL7 426 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 DARS2Q6PI48 645 aaKnown RBP10.14□□□□□ -0.79
RFX3-210ENST00000457373 PID1Q7Z2X4 250 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 ANKMY2Q8IV38 441 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 HTR3CQ8WXA8 447 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 SKA1Q96BD8 255 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 RMDN1Q96DB5 314 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 KLHDC7BQ96G42 594 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 RBM15Q96T37 977 aaKnown RBP eCLIP10.14□□□□□ -0.79
RFX3-210ENST00000457373 C1QTNF2Q9BXJ5 285 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 GAREM1Q9H706 876 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 EVA1BQ9NVM1 165 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 TRMT1Q9NXH9 659 aaKnown RBP10.14□□□□□ -0.79
RFX3-210ENST00000457373 KLHL8Q9P2G9 620 aaPredicted RBP10.14□□□□□ -0.79
RFX3-210ENST00000457373 CHKBQ9Y259 395 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 GPR179Q6PRD1 2367 aa10.14□□□□□ -0.79
RFX3-210ENST00000457373 F5H423 210 aaPredicted RBP10.13□□□□□ -0.79
RFX3-210ENST00000457373 H0Y8X5 98 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 FPGTO14772 594 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 SLC30A4O14863 429 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 ZSCAN12O43309 604 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 FZD6O60353 706 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 OPHN1O60890 802 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 MMP2P08253 660 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 ALPIP09923 528 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 CCNYL3P0C7X3 344 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 THEGLP0DJG4 465 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 RBP3P10745 1247 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 CYP2A6P11509 494 aaPredicted RBP10.13□□□□□ -0.79
RFX3-210ENST00000457373 C6P13671 934 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 LIG3P49916 1009 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 LIMK1P53667 647 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 EPHB1P54762 984 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 SKOR1P84550 965 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 WASHC5Q12768 1159 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 XRCC4Q13426 336 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 PTPRRQ15256 657 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 PCSK7Q16549 785 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 HLA-BQ31612 363 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 DENND2CQ68D51 928 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 ALG1LQ6GMV1 187 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 IL27RAQ6UWB1 636 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 DPPA4Q7L190 304 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms