RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TRIM64A6NGJ6 449 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 TRIM64BA6NI03 449 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 GOSR1O95249 250 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 NFATC1O95644 943 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 TOP3BO95985 862 aaKnown RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 CCDC175P0C221 793 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 TMEM11P17152 192 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 CHRNA5P30532 468 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 PTGER1P34995 402 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 PIK3CAP42336 1068 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 RARRES1P49788 294 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 CCR3P51677 355 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 ECT2LQ008S8 904 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 KLF10Q13118 480 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 E2F5Q15329 346 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 SOWAHAQ2M3V2 549 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 MMEL1Q495T6 779 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 FBLN7Q53RD9 439 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 COLEC12Q5KU26 742 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 LRCH2Q5VUJ6 765 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 DAB2IPQ5VWQ8 1189 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 KRT80Q6KB66 452 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 CEP85Q6P2H3 762 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 AAGABQ6PD74 315 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 PIWIL3Q7Z3Z3 882 aaKnown RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 ZNF804AQ7Z570 1209 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 ADIPOR2Q86V24 386 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 CHSY1Q86X52 802 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 UEVLDQ8IX04 471 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 RNF168Q8IYW5 571 aaPredicted RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 CHCHD4Q8N4Q1 142 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 ZCCHC9Q8N567 271 aaKnown RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 XXYLT1Q8NBI6 393 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 GJC3Q8NFK1 279 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 CMASQ8NFW8 434 aaPredicted RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 HUS1BQ8NHY5 278 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 AFAP1L1Q8TED9 768 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 SIPA1Q96FS4 1042 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 EGLN2Q96KS0 407 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 C20orf173Q96LM9 149 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 MRPL1Q9BYD6 325 aaKnown RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 PPIL3Q9H2H8 161 aaKnown RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 MVB12BQ9H7P6 319 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 ACTR5Q9H9F9 607 aaPredicted RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 TRPV4Q9HBA0 871 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 MOV10Q9HCE1 1003 aaKnown RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 IL17RBQ9NRM6 502 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 LRIT1Q9P2V4 623 aa4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 PPIEQ9UNP9 301 aaKnown RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 EXO1Q9UQ84 846 aaKnown RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 R3HDM2Q9Y2K5 976 aaKnown RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 WBP11Q9Y2W2 641 aaKnown RBP4.3□□□□□ -1.72
HMGN3P1-201ENST00000453847 RNMTO43148 476 aaKnown RBP4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 TMCC1O94876 653 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 FTCDO95954 541 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 TPOP07202 933 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 ETFAP13804 333 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 ANXA7P20073 488 aaKnown RBP4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 HOXA5P20719 270 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 YWHAQP27348 245 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 MCM7P33993 719 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 CCR10P46092 362 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 COMPP49747 757 aaPredicted RBP4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 MMP14P50281 582 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 CLCNKBP51801 687 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 SPOCK1Q08629 439 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 ACSM2AQ08AH3 577 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 TUBA3CQ13748 450 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 NAB2Q15742 525 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 PKN2Q16513 984 aaKnown RBP4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 KRT24Q2M2I5 525 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 C15orf59Q2T9L4 293 aaPredicted RBP4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 USP41Q3LFD5 358 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 ESCO2Q56NI9 601 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 EARS2Q5JPH6 523 aaKnown RBP4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 PRAMEF19Q5SWL8 479 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 RARS2Q5T160 578 aaKnown RBP4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 ASPHD1Q5U4P2 390 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 ACSM2BQ68CK6 577 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 ANKRD54Q6NXT1 300 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 TUBA3EQ6PEY2 450 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 Q6ZPA2 131 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 TAOK1Q7L7X3 1001 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 WDR63Q8IWG1 891 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 SCYL3Q8IZE3 742 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 GUF1Q8N442 669 aaKnown RBP4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 PI4KAP1Q8N8J0 262 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 TC2NQ8N9U0 490 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 KIF18AQ8NI77 898 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 GSDMBQ8TAX9 411 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 GDAP1Q8TB36 358 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 DEPDC1BQ8WUY9 529 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 PTERQ96BW5 349 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 CCDC34Q96HJ3 373 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 SLC41A2Q96JW4 573 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 SLITRK1Q96PX8 696 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 SIN3AQ96ST3 1273 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 CDRT15Q96T59 188 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 HGH1Q9BTY7 390 aa4.29□□□□□ -1.72
HMGN3P1-201ENST00000453847 GOLPH3LQ9H4A5 285 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms