RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 LBHD1Q9BQE6 289 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P16-201ENST00000447155 FUCA2Q9BTY2 467 aa4.65□□□□□ -1.67
HMGB1P16-201ENST00000447155 TMEM45AQ9NWC5 275 aa4.65□□□□□ -1.67
HMGB1P16-201ENST00000447155 CPSF2Q9P2I0 782 aaKnown RBP4.65□□□□□ -1.67
HMGB1P16-201ENST00000447155 TBC1D14Q9P2M4 693 aa4.65□□□□□ -1.67
HMGB1P16-201ENST00000447155 NLKQ9UBE8 527 aa4.65□□□□□ -1.67
HMGB1P16-201ENST00000447155 AGO2Q9UKV8 859 aaKnown RBP4.65□□□□□ -1.67
HMGB1P16-201ENST00000447155 ABCC4O15439 1325 aa4.65□□□□□ -1.67
HMGB1P16-201ENST00000447155 YTHDC2Q9H6S0 1430 aaKnown RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 COL3A1P02461 1466 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 NEXMIFQ5QGS0 1516 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 TRBV5-7A0A0A0MS05 114 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 TEX13CA0A0J9YWL9 993 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 ARHGAP10A1A4S6 786 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 PABPN1LA6NDY0 278 aaKnown RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 TP73O15350 636 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZSCAN12O43309 604 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 STX6O43752 255 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 USO1O60763 962 aaKnown RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 TMCC1O94876 653 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 CLEC3BP05452 202 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 SKILP12757 684 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 PSMA4P25789 261 aaKnown RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 YWHAQP27348 245 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 EPHB2P29323 1055 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLC16A2P36021 539 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 ID2Q02363 134 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 TUBB2AQ13885 445 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 DAZAP2Q15038 168 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 RBBP5Q15291 538 aaKnown RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 EDRF1Q3B7T1 1238 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLC9B1Q4ZJI4 515 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 KIAA1614Q5VZ46 1190 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 PAPD7Q5XG87 772 aaKnown RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 TBC1D9BQ66K14 1250 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 HAUS3Q68CZ6 603 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZNF793Q6ZN11 406 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 NEK10Q6ZWH5 1172 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 KDELC2Q7Z4H8 507 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 CPLX4Q7Z7G2 160 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 FAM185AQ8N0U4 392 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 CCAR2Q8N163 923 aaKnown RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 PLD5Q8N7P1 536 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 ANKRD52Q8NB46 1076 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 METTL6Q8TCB7 284 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 WIPF2Q8TF74 440 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 TMEM170AQ8WVE7 144 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 IGFBPL1Q8WX77 278 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 CUL5Q93034 780 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 SMARCE1Q969G3 411 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 KLHL29Q96CT2 875 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 TUBB2BQ9BVA1 445 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZSCAN16Q9H4T2 348 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 ADARB2Q9NS39 739 aaKnown RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 RNF146Q9NTX7 359 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 TBC1D22BQ9NU19 505 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 BLOC1S4Q9NUP1 217 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 SPATS2LQ9NUQ6 558 aaKnown RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZNF446Q9NWS9 450 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 KIAA1456Q9P272 454 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 FBXO9Q9UK97 447 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 MYO6Q9UM54 1294 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 SMC3Q9UQE7 1217 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 MAP3K5Q99683 1374 aa4.64□□□□□ -1.67
HMGB1P16-201ENST00000447155 PTPRTO14522 1441 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 LMTK2Q8IWU2 1503 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 CEP170BQ9Y4F5 1589 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 TRBV5-3A0A0A0MS03 114 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 GOLGA6L7A0A1B0GV03 622 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 A0A1W2PQM1 296 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 ANKRD18BA2A2Z9 1011 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 CCDC69A6NI79 296 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 RNMTO43148 476 aaKnown RBP4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 ARHGAP25P42331 645 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 CLCNKBP51801 687 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 ARSFP54793 590 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 EIF3BP55884 814 aaKnown RBP4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 INHBEP58166 350 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 YWHAZP63104 245 aaKnown RBP4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 ERV3-1Q14264 604 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 PLCB4Q15147 1175 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 TBCEQ15813 527 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 ME3Q16798 604 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 SYTL3Q4VX76 610 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 GPATCH4Q5T3I0 446 aaKnown RBP4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLC18B1Q6NT16 456 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 LUZP1Q86V48 1076 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 CNGA4Q8IV77 575 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 LRRC8AQ8IWT6 810 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 TEX11Q8IYF3 940 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 DPP10Q8N608 796 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 ETNPPLQ8TBG4 499 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 BICD2Q8TD16 824 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 CABS1Q96KC9 395 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 KLHL15Q96M94 604 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 SH3GL3Q99963 347 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 TREX2Q9BQ50 279 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 QTRT1Q9BXR0 403 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms