RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 EXTL3O43909 919 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 NRP2O60462 931 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 NDUFS2O75306 463 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 ENDOD1O94919 500 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 SBK3P0C264 359 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 ATF3P18847 181 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 GPLD1P80108 840 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 SQLEQ14534 574 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 CBX2Q14781 532 aaPredicted RBP12.85□□□□□ -0.35
HERC3-203ENST00000407637 CDO1Q16878 200 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 SCARA5Q6ZMJ2 495 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.85□□□□□ -0.35
HERC3-203ENST00000407637 CCNYL1Q8N7R7 359 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 DYNC2LI1Q8TCX1 351 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 URGCPQ8TCY9 931 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 PHF10Q8WUB8 498 aaKnown RBP12.85□□□□□ -0.35
HERC3-203ENST00000407637 RASSF5Q8WWW0 418 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 JPH3Q8WXH2 748 aaPredicted RBP12.85□□□□□ -0.35
HERC3-203ENST00000407637 ISL2Q96A47 359 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 SDCCAG3Q96C92 435 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 RMDN1Q96DB5 314 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 CPXM1Q96SM3 734 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 CPNE1Q99829 537 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 ZNF717Q9BY31 904 aaPredicted RBP12.85□□□□□ -0.35
HERC3-203ENST00000407637 TRIM8Q9BZR9 551 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 LTB4R2Q9NPC1 389 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 C8orf4Q9NR00 106 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 GTSE1Q9NYZ3 720 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 STMN3Q9NZ72 180 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 KCNN3Q9UGI6 736 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 V9GYQ6 96 aa12.85□□□□□ -0.35
HERC3-203ENST00000407637 H0YAE9 185 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 ARPC2O15144 300 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 INPP4BO15327 924 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 MTSS1O43312 755 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 USP12O75317 370 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 NDUFB10O96000 172 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 MTHFD1P11586 935 aaKnown RBP12.84□□□□□ -0.35
HERC3-203ENST00000407637 ENPP1P22413 925 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 LIMK2P53671 638 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 NCS1P62166 190 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 POU6F1Q14863 301 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 CYP51A1Q16850 503 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 C15orf59Q2T9L4 293 aaPredicted RBP12.84□□□□□ -0.35
HERC3-203ENST00000407637 COLEC12Q5KU26 742 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 RBM48Q5RL73 367 aaKnown RBP12.84□□□□□ -0.35
HERC3-203ENST00000407637 GRTP1Q5TC63 336 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 AGAP6Q5VW22 663 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 CCBE1Q6UXH8 406 aaPredicted RBP12.84□□□□□ -0.35
HERC3-203ENST00000407637 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 GLRX5Q86SX6 157 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 LSM14AQ8ND56 463 aaKnown RBP12.84□□□□□ -0.35
HERC3-203ENST00000407637 SIMC1Q8NDZ2 872 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 TRPV3Q8NET8 790 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 CERS2Q96G23 380 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 SCYL1Q96KG9 808 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 AGAP4Q96P64 663 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 AGAP2Q99490 1192 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 ZNF518BQ9C0D4 1074 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 STRCP1A6NGW2 1772 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 GFAPP14136 432 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 GTF2E2P29084 291 aaKnown RBP12.84□□□□□ -0.35
HERC3-203ENST00000407637 CDH5P33151 784 aaPredicted RBP12.84□□□□□ -0.35
HERC3-203ENST00000407637 CYP2C18P33260 490 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 YBX1P67809 324 aaKnown RBP12.84□□□□□ -0.35
HERC3-203ENST00000407637 SNX17Q15036 470 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 PYCR3Q53H96 274 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 CYP20A1Q6UW02 462 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 THAP5Q7Z6K1 395 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 XYLT1Q86Y38 959 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 STON2Q8WXE9 905 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 KCTD14Q9BQ13 255 aaPredicted RBP12.84□□□□□ -0.35
HERC3-203ENST00000407637 SLC25A23Q9BV35 468 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 CEP41Q9BYV8 373 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 CCDC90BQ9GZT6 254 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 INTS10Q9NVR2 710 aaKnown RBP12.84□□□□□ -0.35
HERC3-203ENST00000407637 PAQR5Q9NXK6 330 aaPredicted RBP12.84□□□□□ -0.35
HERC3-203ENST00000407637 SNX5Q9Y5X3 404 aa12.84□□□□□ -0.35
HERC3-203ENST00000407637 SRCAPQ6ZRS2 3230 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 LOC102724428A0A0B4J2F2 783 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 UBDO15205 165 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 ZW10O43264 779 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 MPOP05164 745 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 SAT1P21673 171 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 SPRP35270 261 aaPredicted RBP12.83□□□□□ -0.36
HERC3-203ENST00000407637 TGFBR1P36897 503 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 SIK1P57059 783 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 SEMA5AQ13591 1074 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 MEP1AQ16819 746 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 PUS10Q3MIT2 529 aaKnown RBP12.83□□□□□ -0.36
HERC3-203ENST00000407637 LCN8Q6JVE9 175 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 SLC51BQ86UW2 128 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 RETREG3Q86VR2 466 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 PCDH19Q8TAB3 1148 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 SPPL2BQ8TCT7 592 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 CHAC2Q8WUX2 184 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 RIT2Q99578 217 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 TTYH2Q9BSA4 534 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 C12orf4Q9NQ89 552 aa12.83□□□□□ -0.36
HERC3-203ENST00000407637 HPS4Q9NQG7 708 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms