RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 NtpcrQ9CQA9 190 aaKnown RBP14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Cdyl2Q9D5D8 503 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Kat2bQ9JHD1 813 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Gm28360A0A087WR25 190 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 GzmkO35205 263 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ptch2O35595 1182 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Sdc4O35988 198 aaKnown RBP14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 P01668 110 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Cd4P06332 457 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Krt6aP50446 553 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Gata5P97489 404 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Fads2p1Q0VAX3 487 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ccdc127Q3TC33 260 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 OtulinQ3UCV8 352 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Trafd1Q3UDK1 580 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Nat9Q3UG98 241 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ephx3Q3V1F8 367 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Luc7l3Q5SUF2 432 aaKnown RBP14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Bdkrb1Q61125 334 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Stx3Q64704 289 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 ScapQ6GQT6 1276 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Orai3Q6P8G8 290 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Plekhs1Q8BW88 474 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Fem1cQ8CEF1 617 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Lars2Q8VDC0 902 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Olfr371Q8VGB8 312 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 FtcdQ91XD4 541 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ier5lQ99J55 406 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Homer3Q99JP6 356 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Setd6Q9CWY3 473 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Maged2Q9ER67 616 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Fhl5Q9WTX7 284 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Cldn3Q9Z0G9 219 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 RecqlQ9Z129 648 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Nfs1Q9Z1J3 459 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Tdrd6P61407 2134 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Frem3Q5H8B9 2123 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Mkrn2osD3Z393 217 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Nkx1-1G3UXB3 402 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Il13ra1O09030 424 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Mybpc3O70468 1270 aaKnown RBP14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 BpgmP15327 259 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 ItgavP43406 1044 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Upp1P52624 311 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 AdprhP54923 362 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ubtfl1Q3USZ2 394 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Atg16l1Q8C0J2 607 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Fnbp1lQ8K012 605 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Zfp65Q91W94 390 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Trim7Q923T7 510 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Dhrs7bQ99J47 323 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ska2Q9CR46 120 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 B9d1Q9R1S0 204 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Htatip2Q9Z2G9 242 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Cib2Q9Z309 187 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 A630010A05RikA9C473 232 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Cylc2B1AWN8 422 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Gm20431E9PY39 371 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 E2f6O54917 272 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 P01740 135 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Rab21P35282 222 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Klf1P46099 358 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Resp18P47939 175 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Nudt1P53368 156 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Lim2P56563 173 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 SnnP61807 88 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 G3bp2P97379 482 aaKnown RBP14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 DselQ0VBN2 1207 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Sdf4Q61112 361 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Fastkd5Q7TMV3 762 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Arfip2Q8K221 341 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 NeproQ8R2U2 564 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Q8VDP2 222 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Pofut2Q8VHI3 429 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Zfp655Q9CZP3 541 aaKnown RBP14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Fam83dQ9D7I8 585 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Nt5cQ9JM14 200 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ruvbl2Q9WTM5 463 aaKnown RBP14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Shcbp1Q9Z179 668 aa14.87□□□□□ -0.03
Nup88-202ENSMUST00000108530 Umodl1Q5DID3 1319 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Pcna-ps2A0A140T8V5 261 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Mroh7A2AVR2 1279 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Slfn8B1ARD8 910 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Cyp4f17G3UW78 524 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Stx7O70439 261 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 H2-Eb1P04230 264 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 KitP05532 979 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 PolP11369 1281 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 PcnaP17918 261 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Yap1P46938 488 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ppp3ccP48455 513 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ranbp9P69566 653 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Mdga1Q0PMG2 940 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Hsdl2Q2TPA8 490 aaKnown RBP14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Akap14Q3V0I7 536 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Serpina3gQ5I2A0 440 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Rapgefl1Q68EF8 662 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Rps6kc1Q8BLK9 1056 aa14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Tfb1mQ8JZM0 345 aaKnown RBP14.86□□□□□ -0.03
Nup88-202ENSMUST00000108530 Sirt3Q8R104 334 aa14.86□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 64.1 ms