RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 CXCL14O95715 111 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 SLC6A9P48067 706 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 AP1S1P61966 158 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 KPNB1Q14974 876 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 ABRAXAS1Q6UWZ7 409 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 LSM14AQ8ND56 463 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 TMBIM4Q9HC24 238 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 CNTNAP5Q8WYK1 1306 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 TRIM38O00635 465 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 PLIN3O60664 434 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 RNASEH2AO75792 299 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 LINGO3P0C6S8 592 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 FDX1P10109 184 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 KDM5CP41229 1560 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 CAPN6Q9Y6Q1 641 aa16.46■□□□□ 0.23
CACNA1A-238ENST00000637276 NRKQ7Z2Y5 1582 aa16.46■□□□□ 0.22
CACNA1A-238ENST00000637276 SAP18O00422 153 aaKnown RBP16.46■□□□□ 0.22
CACNA1A-238ENST00000637276 HCN1O60741 890 aa16.46■□□□□ 0.22
CACNA1A-238ENST00000637276 SSTR1P30872 391 aa16.46■□□□□ 0.22
CACNA1A-238ENST00000637276 SGMS1Q86VZ5 419 aa16.46■□□□□ 0.22
CACNA1A-238ENST00000637276 UBR7Q8N806 425 aa16.46■□□□□ 0.22
CACNA1A-238ENST00000637276 TEX47Q8TBZ9 253 aa16.46■□□□□ 0.22
CACNA1A-238ENST00000637276 RADILQ96JH8 1075 aa16.46■□□□□ 0.22
CACNA1A-238ENST00000637276 CROTQ9UKG9 612 aa16.46■□□□□ 0.22
CACNA1A-238ENST00000637276 RGSL1A5PLK6 1076 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 XKRYO14609 159 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 MECP2P51608 486 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 TARBP2Q15633 366 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 PIK3R6Q5UE93 754 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 PPP1R16AQ96I34 528 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 RIPOR3Q96MK2 946 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 CTPS2Q9NRF8 586 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 TSPAN16Q9UKR8 245 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 FBXW2Q9UKT8 454 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 FSBPO95073 299 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 NR4A1P22736 598 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 CXCR2P25025 360 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 SLC2A14Q8TDB8 520 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 THRSPQ92748 146 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 SLC25A36Q96CQ1 311 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 CDRT15Q96T59 188 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 HMX1Q9NP08 348 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 EGFL7Q9UHF1 273 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 ACOT9Q9Y305 439 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 USP42Q9H9J4 1324 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 FAM227AF5H4B4 570 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 FADS2O95864 444 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 ALDH4A1P30038 563 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 SPAM1P38567 509 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 HERVK_113P62684 666 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 IKBKEQ14164 716 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 NR2E1Q9Y466 385 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 RB1P06400 928 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 VIL1P09327 827 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 CALB2P22676 271 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 OR52J3Q8NH60 311 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 TBC1D13Q9NVG8 400 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 DGKBQ9Y6T7 804 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 TPPPO94811 219 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 ECH1Q13011 328 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 DGKZQ13574 1117 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 ALX1Q15699 326 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 CST11Q9H112 138 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 CISHQ9NSE2 258 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 RAD54BQ9Y620 910 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 PLEKHG2Q9H7P9 1386 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 ZNF189O75820 626 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 IL12BP29460 328 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 CD151P48509 253 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 USF2Q15853 346 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 PHC3Q8NDX5 983 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 RFT1Q96AA3 541 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 ZCCHC2Q9C0B9 1178 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 B3GNT4Q9C0J1 378 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 BATF3Q9NR55 127 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 IFT52Q9Y366 437 aa16.45■□□□□ 0.22
CACNA1A-238ENST00000637276 SLC25A27O95847 323 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 FAM58BPP0C7Q3 252 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 ANPEPP15144 967 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 ARFIP1P53367 373 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 SNU13P55769 128 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 CCINQ13939 588 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 SH3PXD2AQ5TCZ1 1133 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 NYAP1Q6ZVC0 841 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 PTCHD4Q6ZW05 846 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 OR2L8Q8NGY9 312 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 ADGRA3Q8IWK6 1321 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 SSU72P8A0A1W2PR75 194 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 MANFP55145 182 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 FAM131AQ6UXB0 335 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 TMPRSS11BQ86T26 416 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 MAP4K5Q9Y4K4 846 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 ADGRL3Q9HAR2 1447 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 TULP3O75386 442 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 SLC25A14O95258 325 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 RABGGTBP53611 331 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 ACSM2AQ08AH3 577 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 ITGB3BPQ13352 177 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 C1orf189Q5VU69 101 aa16.44■□□□□ 0.22
CACNA1A-238ENST00000637276 ACSM2BQ68CK6 577 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms