RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZMIZ1Q9ULJ6 1067 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 ATP8A1Q9Y2Q0 1164 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 ZFHX4Q86UP3 3567 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 PLXNA2O75051 1894 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 H3BM21 787 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 TPP1O14773 563 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 HTRA2O43464 458 aaPredicted RBP10.59□□□□□ -0.71
CCDC9-203ENST00000596938 SOCS5O75159 536 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 MTA2O94776 668 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 CD48P09326 243 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 ALPPL2P10696 532 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 CKMT1AP12532 417 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 C6P13671 934 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 JUNDP17535 347 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 IGFALSP35858 605 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 ARHGAP25P42331 645 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 THOP1P52888 689 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 ADKP55263 362 aaKnown RBP10.59□□□□□ -0.71
CCDC9-203ENST00000596938 E2F1Q01094 437 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 EIF2B5Q13144 721 aaKnown RBP10.59□□□□□ -0.71
CCDC9-203ENST00000596938 MMRN1Q13201 1228 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 CAMK2BQ13554 666 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 DPYSL3Q14195 570 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 ZNF235Q14590 738 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 TCEAL1Q15170 157 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 WSCD2Q2TBF2 565 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 CCDC157Q569K6 752 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 ANKRD20A8PQ5CZ79 823 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 TPRG1LQ5T0D9 272 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 CNGA4Q8IV77 575 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 BBS5Q8N3I7 341 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 PGBD5Q8N414 524 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 ATPAF2Q8N5M1 289 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 TEX26Q8N6G2 289 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 PCDH19Q8TAB3 1148 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 SLC35G2Q8TBE7 412 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 FAF2Q96CS3 445 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 TBATAQ96M53 351 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 TSGA13Q96PP4 275 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 MGME1Q9BQP7 344 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 ZNF670Q9BS34 389 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 USP29Q9HBJ7 922 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 NOD2Q9HC29 1040 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 DKK4Q9UBT3 224 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 INTUQ9ULD6 942 aa10.59□□□□□ -0.71
CCDC9-203ENST00000596938 USP24Q9UPU5 2620 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 AKR1B15C9JRZ8 316 aaPredicted RBP10.58□□□□□ -0.72
CCDC9-203ENST00000596938 K7ESM1 405 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 MATN3O15232 486 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 AQP9O43315 295 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 LZTS3O60299 673 aaPredicted RBP10.58□□□□□ -0.72
CCDC9-203ENST00000596938 KRT37O76014 449 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 JUPP14923 745 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 CES1P23141 567 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 CCNCP24863 283 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 GARSP41250 739 aaKnown RBP10.58□□□□□ -0.72
CCDC9-203ENST00000596938 MMP13P45452 471 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 TAS2R40P59535 323 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 GALNT2Q10471 571 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 INPP5AQ14642 412 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 MESDQ14696 234 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 LIPIQ6XZB0 460 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 MACC1Q6ZN28 852 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 DPPA4Q7L190 304 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 CPNE8Q86YQ8 564 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 RHOT2Q8IXI1 618 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 CBARPQ8N350 705 aaPredicted RBP10.58□□□□□ -0.72
CCDC9-203ENST00000596938 PDCD7Q8N8D1 485 aaKnown RBP10.58□□□□□ -0.72
CCDC9-203ENST00000596938 ZNF548Q8NEK5 533 aaPredicted RBP10.58□□□□□ -0.72
CCDC9-203ENST00000596938 ZCCHC14Q8WYQ9 949 aaKnown RBP10.58□□□□□ -0.72
CCDC9-203ENST00000596938 RFFLQ8WZ73 363 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 MAML1Q92585 1016 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 SCUBE2Q9NQ36 999 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 NCKIPSDQ9NZQ3 722 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 AMACRQ9UHK6 382 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 SALL4Q9UJQ4 1053 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 PHTF1Q9UMS5 762 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 PPIL1Q9Y3C6 166 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 PCDHGC4Q9Y5F7 938 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 CFAP47Q6ZTR5 3102 aa10.58□□□□□ -0.72
CCDC9-203ENST00000596938 NYNRINQ9P2P1 1898 aaKnown RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 MAP1BP46821 2468 aaKnown RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 COL5A1P20908 1838 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 TTC24A2A3L6 582 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 TRABD2BA6NFA1 517 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 SRRM3A6NNA2 597 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 ZNF487B1APH4 448 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 FFAR2O15552 330 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 RECQL5O94762 991 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 GP1BAP07359 652 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 HOXC4P09017 264 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 MX2P20592 715 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 KDELR1P24390 212 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 NFKBIAP25963 317 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 HTR1BP28222 390 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 HNF1BP35680 557 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 TRIM23P36406 574 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 BLKP51451 505 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 DUSP3P51452 185 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 PPARDQ03181 441 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms